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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170251168
CEQT01064939
256881
Gammaproteobacteria
GTG
His
>WENV170251164
CEQT01064900
18367
Gammaproteobacteria
GCT
Ser
>WENV170250941
CEQT01037991
65736
Gammaproteobacteria
TAA
Leu
>WENV170251191
CEQT01067732
164285
Gammaproteobacteria
TCG
Arg
>WENV170250698
CEQT01010753
448070
Gammaproteobacteria
GCA
Cys
>WENV170250849
CEQT01026686
77430
Gammaproteobacteria
CAG
Leu
>WENV170250850
CEQT01026686
77430
Gammaproteobacteria
CAG
Leu
>WENV170251169
CEQT01064939
106574
Gammaproteobacteria
TAG
Leu
>WENV170251821
CEQT01138692
307111
Gammaproteobacteria
TAC
Val
>WENV170251165
CEQT01064900
214281
Gammaproteobacteria
ACG
Arg
>WENV170251166
CEQT01064900
214281
Gammaproteobacteria
ACG
Arg
>WENV170252321
CEQT01284798
402497
Gammaproteobacteria
CTG
Gln
>WENV170250884
CEQT01031637
290512
Gammaproteobacteria
TGT
Thr
>WENV170250670
CEQT01007945
26256
Gammaproteobacteria
CGA
Ser
>WENV170251738
CEQT01133143
282566
Gammaproteobacteria
GGT
Thr
>WENV170251006
CEQT01045645
265381
Gammaproteobacteria
GTT
Asn
>WENV170252044
CEQT01205486
449736
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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