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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170253467
CEQU01090277
252328
Alphaproteobacteria
TTT
Lys
>WENV170253879
CEQU01171816
381459
Alphaproteobacteria
CAC
Val
>WENV170253037
CEQU01047223
191197
Alphaproteobacteria
CCG
Arg
>WENV170253882
CEQU01173293
199865
Alphaproteobacteria
CAT
Met
>WENV170252901
CEQU01036512
150677
Alphaproteobacteria
GTC
Asp
>WENV170253392
CEQU01082021
252375
Alphaproteobacteria
GTT
Asn
>WENV170253769
CEQU01121659
339725
Alphaproteobacteria
GAA
Phe
>WENV170253478
CEQU01091611
254522
Alphaproteobacteria
GAA
Phe
>WENV170253789
CEQU01132731
10657
Alphaproteobacteria
GCT
Ser
>WENV170252952
CEQU01040207
412281
Alphaproteobacteria
CTG
Gln
>WENV170252919
CEQU01037169
369678
Alphaproteobacteria
GGT
Thr
>WENV170252454
CEQU01008552
339639
Alphaproteobacteria
TTG
Gln
>WENV170253750
CEQU01111429
150356
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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