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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170257715
CEQY01005027
370838
Cyanobacteriota
CCC
Gly
>WENV170260041
CEQY01370055
89063
Cyanobacteriota
TAG
Leu
>WENV170259222
CEQY01157772
161711
Cyanobacteriota
GTC
Asp
>WENV170259534
CEQY01190645
270573
Cyanobacteriota
GTG
His
>WENV170257909
CEQY01023721
185932
Cyanobacteriota
GTC
Asp
>WENV170259015
CEQY01132864
258993
Cyanobacteriota
CCA
Trp
>WENV170257861
CEQY01019098
161710
Cyanobacteriota
ACG
Arg
>WENV170258603
CEQY01086617
161710
Cyanobacteriota
ACG
Arg
>WENV170258594
CEQY01085765
161771
Cyanobacteriota
CAT
Met
>WENV170259029
CEQY01134572
161771
Cyanobacteriota
CAT
Met
>WENV170259830
CEQY01222261
369944
Cyanobacteriota
GAC
Val
>WENV170260095
CEQY01387611
260660
Cyanobacteriota
GTG
His
>WENV170259969
CEQY01336625
26564
Cyanobacteriota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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