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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260325
CEQZ01012826
160199
Alphaproteobacteria
GGG
Pro
>WENV170260194
CEQZ01000543
161005
Alphaproteobacteria
GAC
Val
>WENV170260352
CEQZ01016143
383423
Alphaproteobacteria
GAC
Val
>WENV170260418
CEQZ01027838
160201
Alphaproteobacteria
TGG
Pro
>WENV170260512
CEQZ01055571
89125
Alphaproteobacteria
CAG
Leu
>WENV170260244
CEQZ01003039
259585
Alphaproteobacteria
CCA
Trp
>WENV170260470
CEQZ01049076
259905
Alphaproteobacteria
CCA
Trp
>WENV170260245
CEQZ01003094
26668
Alphaproteobacteria
GCT
Ser
>WENV170260302
CEQZ01008890
26668
Alphaproteobacteria
GCT
Ser
>WENV170260341
CEQZ01014639
161011
Alphaproteobacteria
ACG
Arg
>WENV170260323
CEQZ01012692
26445
Alphaproteobacteria
GGA
Ser
>WENV170260456
CEQZ01046137
383286
Alphaproteobacteria
GGT
Thr
>WENV170260299
CEQZ01008586
451392
Alphaproteobacteria
TCC
Gly
>WENV170260321
CEQZ01012282
259901
Alphaproteobacteria
GTT
Asn
>WENV170260329
CEQZ01013036
160197
Alphaproteobacteria
GTC
Asp
>WENV170260499
CEQZ01053639
448346
Alphaproteobacteria
CCC
Gly
>WENV170260270
CEQZ01005685
206052
Alphaproteobacteria
>WENV170260275
CEQZ01006046
105591
Alphaproteobacteria
GTA
Tyr
>WENV170260401
CEQZ01020338
382308
Alphaproteobacteria
GAA
Phe
>WENV170260202
CEQZ01001084
209273
Alphaproteobacteria
GTG
His
>WENV170260373
CEQZ01017886
105590
Alphaproteobacteria
TAG
Leu
>WENV170260274
CEQZ01006046
161013
Alphaproteobacteria
TGT
Thr
>WENV170260380
CEQZ01018115
161006
Alphaproteobacteria
TGG
Pro
>WENV170260303
CEQZ01008922
27338
Alphaproteobacteria
CGA
Ser
>WENV170260363
CEQZ01017038
26444
Alphaproteobacteria
TGA
Ser
>WENV170260255
CEQZ01004136
175700
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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