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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260495
CEQZ01053164
213750
Bacteroidota
GTT
Asn
>WENV170260453
CEQZ01044633
132066
Bacteroidota
CAA
Leu
>WENV170260370
CEQZ01017702
448526
Bacteroidota
TTG
Gln
>WENV170260474
CEQZ01049709
175346
Bacteroidota
>WENV170260409
CEQZ01022976
171373
Bacteroidota
GTG
His
>WENV170260439
CEQZ01039111
12157
Bacteroidota
GCT
Ser
>WENV170260407
CEQZ01022603
56567
Bacteroidota
GAG
Leu
>WENV170260476
CEQZ01050285
160922
Bacteroidota
GTG
His
>WENV170260501
CEQZ01054320
77474
Bacteroidota
TAA
Leu
>WENV170260526
CEQZ01056759
57357
Bacteroidota
TGA
Ser
>WENV170260514
CEQZ01055662
67292
Bacteroidota
GAG
Leu
>WENV170260427
CEQZ01032823
258133
Bacteroidota
>WENV170260523
CEQZ01056466
150855
Bacteroidota
TAC
Val
>WENV170260482
CEQZ01051546
139057
Bacteroidota
GAC
Val
>WENV170260504
CEQZ01054576
161858
Bacteroidota
GGG
Pro
>WENV170260496
CEQZ01053188
210921
Bacteroidota
GGC
Ala
>WENV170260428
CEQZ01033045
213501
Bacteroidota
GTC
Asp
>WENV170260484
CEQZ01051772
158528
Bacteroidota
>WENV170260413
CEQZ01025823
325477
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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