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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260388
CEQZ01018192
178166
Gammaproteobacteria
CAT
Met
>WENV170260452
CEQZ01044269
160115
Gammaproteobacteria
GGG
Pro
>WENV170260267
CEQZ01005558
161430
Gammaproteobacteria
CCG
Arg
>WENV170260279
CEQZ01006401
64907
Gammaproteobacteria
GAG
Leu
>WENV170260261
CEQZ01004835
210855
Gammaproteobacteria
ACG
Arg
>WENV170260262
CEQZ01005115
23501
Gammaproteobacteria
GCT
Ser
>WENV170260219
CEQZ01001966
19344
Gammaproteobacteria
GGA
Ser
>WENV170260241
CEQZ01002956
125783
Gammaproteobacteria
GTA
Tyr
>WENV170260249
CEQZ01003237
260947
Gammaproteobacteria
TTG
Gln
>WENV170260410
CEQZ01023278
260947
Gammaproteobacteria
TTG
Gln
>WENV170260503
CEQZ01054494
65163
Gammaproteobacteria
CAA
Leu
>WENV170260463
CEQZ01047591
159506
Gammaproteobacteria
CCG
Arg
>WENV170260276
CEQZ01006195
412618
Gammaproteobacteria
TTG
Gln
>WENV170260356
CEQZ01016352
271667
Gammaproteobacteria
TTT
Lys
>WENV170260327
CEQZ01012985
164285
Gammaproteobacteria
TCG
Arg
>WENV170260196
CEQZ01000693
77430
Gammaproteobacteria
CAG
Leu
>WENV170260338
CEQZ01014147
256945
Gammaproteobacteria
GAA
Phe
>WENV170260333
CEQZ01013471
159505
Gammaproteobacteria
CGG
Pro
>WENV170260198
CEQZ01000801
10504
Gammaproteobacteria
GCT
Ser
>WENV170260230
CEQZ01002526
161327
Gammaproteobacteria
ACG
Arg
>WENV170260231
CEQZ01002526
161327
Gammaproteobacteria
ACG
Arg
>WENV170260355
CEQZ01016330
402449
Gammaproteobacteria
TTT
Lys
>WENV170260259
CEQZ01004755
170513
Gammaproteobacteria
GAC
Val
>WENV170260271
CEQZ01005955
105274
Gammaproteobacteria
TAG
Leu
>WENV170260494
CEQZ01053095
402497
Gammaproteobacteria
CTG
Gln
>WENV170260339
CEQZ01014217
159512
Gammaproteobacteria
GGG
Pro
>WENV170260478
CEQZ01051161
160118
Gammaproteobacteria
GTT
Asn
>WENV170260400
CEQZ01019140
290512
Gammaproteobacteria
TGT
Thr
>WENV170260389
CEQZ01018193
172146
Gammaproteobacteria
GGG
Pro
>WENV170260423
CEQZ01032214
191341
Gammaproteobacteria
CAT
Met
>WENV170260265
CEQZ01005346
159609
Gammaproteobacteria
ACG
Arg
>WENV170260381
CEQZ01018123
19518
Gammaproteobacteria
TGA
Ser
>WENV170260208
CEQZ01001278
271668
Gammaproteobacteria
TGT
Thr
>WENV170260281
CEQZ01006436
265381
Gammaproteobacteria
GTT
Asn
>WENV170260530
CEQZ01057046
370629
Gammaproteobacteria
TTT
Lys
>WENV170260387
CEQZ01018192
410254
Gammaproteobacteria
TTG
Gln
>WENV170260304
CEQZ01009138
271669
Gammaproteobacteria
GAA
Phe
>WENV170260345
CEQZ01014975
3825
Gammaproteobacteria
>WENV170260216
CEQZ01001862
159507
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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