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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170261643
CERB01096134
139500
Bacteroidota
TGG
Pro
>WENV170262351
CERB01174584
448526
Bacteroidota
TTG
Gln
>WENV170261854
CERB01119615
300555
Bacteroidota
CCA
Trp
>WENV170261738
CERB01105932
175653
Bacteroidota
TGC
Ala
>WENV170262299
CERB01170052
139484
Bacteroidota
TAC
Val
>WENV170262328
CERB01172036
12157
Bacteroidota
GCT
Ser
>WENV170262654
CERB01291690
160922
Bacteroidota
GTG
His
>WENV170262392
CERB01177149
49870
Bacteroidota
TGA
Ser
>WENV170262700
CERB01309718
385890
Bacteroidota
TTC
Glu
>WENV170261015
CERB01033016
263627
Bacteroidota
TTG
Gln
>WENV170261486
CERB01080105
177164
Bacteroidota
GTC
Asp
>WENV170262802
CERB01342248
139057
Bacteroidota
GAC
Val
>WENV170261345
CERB01063363
188048
Bacteroidota
GGC
Ala
>WENV170261496
CERB01081187
188048
Bacteroidota
GGC
Ala
>WENV170262683
CERB01303436
257687
Bacteroidota
TTT
Lys
>WENV170260880
CERB01018665
144149
Bacteroidota
TGG
Pro
>WENV170262633
CERB01279225
263162
Bacteroidota
GGG
Pro
>WENV170262304
CERB01170264
161858
Bacteroidota
GGG
Pro
>WENV170261196
CERB01047917
50353
Bacteroidota
TGA
Ser
>WENV170261524
CERB01084504
172034
Bacteroidota
TGT
Thr
>WENV170261786
CERB01110715
106261
Bacteroidota
TAG
Leu
>WENV170261737
CERB01105932
160456
Bacteroidota
GAT
Ile
>WENV170261436
CERB01073771
188006
Bacteroidota
TCT
Arg
>WENV170262673
CERB01298835
158528
Bacteroidota
>WENV170262277
CERB01167847
268445
Bacteroidota
GAA
Phe
>WENV170261678
CERB01099180
18750
Bacteroidota
GGA
Ser
>WENV170261706
CERB01102605
158556
Bacteroidota
GTT
Asn
>WENV170261510
CERB01082498
139231
Bacteroidota
GAC
Val
>WENV170262190
CERB01158070
172819
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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