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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170263813
CERC01092282
160199
Alphaproteobacteria
GGG
Pro
>WENV170263944
CERC01121883
448544
Alphaproteobacteria
CTG
Gln
>WENV170263021
CERC01012542
167093
Alphaproteobacteria
GTC
Asp
>WENV170263109
CERC01018122
167093
Alphaproteobacteria
GTC
Asp
>WENV170263018
CERC01012305
259905
Alphaproteobacteria
CCA
Trp
>WENV170263426
CERC01046108
88964
Alphaproteobacteria
CAA
Leu
>WENV170262949
CERC01006763
309312
Alphaproteobacteria
TGC
Ala
>WENV170262908
CERC01004214
369985
Alphaproteobacteria
GAA
Phe
>WENV170262952
CERC01007004
161011
Alphaproteobacteria
ACG
Arg
>WENV170263053
CERC01015030
26445
Alphaproteobacteria
GGA
Ser
>WENV170263526
CERC01054912
383286
Alphaproteobacteria
GGT
Thr
>WENV170263863
CERC01103631
448545
Alphaproteobacteria
>WENV170263198
CERC01025768
462157
Alphaproteobacteria
TCC
Gly
>WENV170263095
CERC01018084
177275
Alphaproteobacteria
GTC
Asp
>WENV170263475
CERC01051897
259904
Alphaproteobacteria
TTT
Lys
>WENV170263877
CERC01106827
26326
Alphaproteobacteria
CGA
Ser
>WENV170263089
CERC01017987
259901
Alphaproteobacteria
GTT
Asn
>WENV170263792
CERC01085709
160197
Alphaproteobacteria
GTC
Asp
>WENV170263498
CERC01053371
203353
Alphaproteobacteria
CAT
Met
>WENV170262942
CERC01006351
451387
Alphaproteobacteria
TCC
Gly
>WENV170263037
CERC01013922
105590
Alphaproteobacteria
TAG
Leu
>WENV170263677
CERC01065969
161013
Alphaproteobacteria
TGT
Thr
>WENV170263934
CERC01119860
105419
Alphaproteobacteria
TAA
Leu
>WENV170263173
CERC01023657
161006
Alphaproteobacteria
TGG
Pro
>WENV170263065
CERC01016119
26444
Alphaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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