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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170264812
CERD01072315
126974
Bacteroidota
TAC
Val
>WENV170265151
CERD01114373
238765
Bacteroidota
GCC
Gly
>WENV170265575
CERD01223412
294483
Bacteroidota
TTT
Lys
>WENV170265588
CERD01225910
187493
Bacteroidota
GGC
Ala
>WENV170265620
CERD01230866
148046
Bacteroidota
GGG
Pro
>WENV170264979
CERD01095197
236125
Bacteroidota
GAA
Phe
>WENV170264646
CERD01053704
273242
Bacteroidota
CCA
Trp
>WENV170264648
CERD01053744
60695
Bacteroidota
GCT
Ser
>WENV170265338
CERD01127766
150103
Bacteroidota
GTG
His
>WENV170264683
CERD01059960
127414
Bacteroidota
TGG
Pro
>WENV170264946
CERD01090030
238764
Bacteroidota
>WENV170264605
CERD01049237
238764
Bacteroidota
>WENV170265153
CERD01114450
274593
Bacteroidota
TTG
Gln
>WENV170265100
CERD01108826
274593
Bacteroidota
TTG
Gln
>WENV170264458
CERD01035100
44938
Bacteroidota
TGA
Ser
>WENV170264109
CERD01005677
17987
Bacteroidota
GGA
Ser
>WENV170264813
CERD01072315
126712
Bacteroidota
GAC
Val
>WENV170265454
CERD01185295
342872
Bacteroidota
GGT
Thr
>WENV170264747
CERD01065520
145555
Bacteroidota
GTC
Asp
>WENV170265573
CERD01222735
48382
Bacteroidota
TGA
Ser
>WENV170264706
CERD01060672
60370
Bacteroidota
GAG
Leu
>WENV170265548
CERD01218628
145405
Bacteroidota
GTC
Asp
>WENV170265275
CERD01125466
16286
Bacteroidota
GGA
Ser
>WENV170265337
CERD01127766
148047
Bacteroidota
CAT
Met
>WENV170264528
CERD01041293
179613
Bacteroidota
CAT
Met
>WENV170264684
CERD01059961
13120
Bacteroidota
GCT
Ser
>WENV170264895
CERD01082051
119524
Bacteroidota
CAA
Leu
>WENV170264271
CERD01019878
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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