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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170268526
CERG01093790
139505
Bacteroidota
TAC
Val
>WENV170268474
CERG01089735
57357
Bacteroidota
TGA
Ser
>WENV170268287
CERG01066699
21418
Bacteroidota
GGA
Ser
>WENV170267415
CERG01001293
263627
Bacteroidota
TTG
Gln
>WENV170268515
CERG01092860
263627
Bacteroidota
TTG
Gln
>WENV170268591
CERG01097801
177164
Bacteroidota
GTC
Asp
>WENV170268428
CERG01085392
257687
Bacteroidota
TTT
Lys
>WENV170268371
CERG01077912
144149
Bacteroidota
TGG
Pro
>WENV170268705
CERG01132394
263162
Bacteroidota
GGG
Pro
>WENV170268354
CERG01075729
321470
Bacteroidota
GAA
Phe
>WENV170267419
CERG01001485
310118
Bacteroidota
CCA
Trp
>WENV170268010
CERG01039070
310118
Bacteroidota
CCA
Trp
>WENV170267643
CERG01015283
18750
Bacteroidota
GGA
Ser
>WENV170268227
CERG01059231
301008
Bacteroidota
TTG
Gln
>WENV170267630
CERG01014446
60145
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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