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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170270605
CERI01106226
237987
Bacteroidota
CAT
Met
>WENV170270216
CERI01067481
456030
Bacteroidota
CCA
Trp
>WENV170270941
CERI01176382
390361
Bacteroidota
CCT
Arg
>WENV170269441
CERI01002991
69105
Bacteroidota
GCT
Ser
>WENV170270288
CERI01074725
12157
Bacteroidota
GCT
Ser
>WENV170270553
CERI01102386
177164
Bacteroidota
GTC
Asp
>WENV170269416
CERI01001672
197208
Bacteroidota
GTT
Asn
>WENV170269400
CERI01000633
119207
Bacteroidota
TAG
Leu
>WENV170270508
CERI01097307
119207
Bacteroidota
TAG
Leu
>WENV170270996
CERI01204712
161475
Bacteroidota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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