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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170276725
CERO01015550
160199
Alphaproteobacteria
GGG
Pro
>WENV170276938
CERO01077940
369984
Alphaproteobacteria
TTG
Gln
>WENV170276911
CERO01069396
453062
Alphaproteobacteria
CCC
Gly
>WENV170276722
CERO01015267
167093
Alphaproteobacteria
GTC
Asp
>WENV170276922
CERO01075372
380306
Alphaproteobacteria
GGT
Thr
>WENV170276657
CERO01004950
448621
Alphaproteobacteria
GCA
Cys
>WENV170276932
CERO01076603
291340
Alphaproteobacteria
CGT
Thr
>WENV170276804
CERO01032243
259905
Alphaproteobacteria
CCA
Trp
>WENV170276917
CERO01074077
88964
Alphaproteobacteria
CAA
Leu
>WENV170276877
CERO01046441
159281
Alphaproteobacteria
GTG
His
>WENV170276894
CERO01057085
26445
Alphaproteobacteria
GGA
Ser
>WENV170276690
CERO01010020
382945
Alphaproteobacteria
GGT
Thr
>WENV170276948
CERO01081472
451392
Alphaproteobacteria
TCC
Gly
>WENV170276829
CERO01036400
259902
Alphaproteobacteria
GGC
Ala
>WENV170276731
CERO01016815
259904
Alphaproteobacteria
TTT
Lys
>WENV170276673
CERO01007731
160197
Alphaproteobacteria
GTC
Asp
>WENV170276813
CERO01033491
159474
Alphaproteobacteria
ACG
Arg
>WENV170276905
CERO01064386
451387
Alphaproteobacteria
TCC
Gly
>WENV170276702
CERO01012087
161013
Alphaproteobacteria
TGT
Thr
>WENV170276853
CERO01037620
282381
Alphaproteobacteria
CCA
Trp
>WENV170276959
CERO01084772
105419
Alphaproteobacteria
TAA
Leu
>WENV170276710
CERO01013572
65064
Alphaproteobacteria
GAG
Leu
>WENV170276625
CERO01002765
12053
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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