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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170276753
CERO01021755
277731
Bacteroidota
>WENV170276641
CERO01004173
175677
Bacteroidota
GGC
Ala
>WENV170276639
CERO01003583
175653
Bacteroidota
TGC
Ala
>WENV170276685
CERO01008932
51705
Bacteroidota
TGA
Ser
>WENV170276744
CERO01018913
169559
Bacteroidota
GGG
Pro
>WENV170276706
CERO01012687
138865
Bacteroidota
>WENV170276705
CERO01012687
68627
Bacteroidota
GCT
Ser
>WENV170276642
CERO01004186
267059
Bacteroidota
GAA
Phe
>WENV170276884
CERO01052279
454104
Bacteroidota
GCA
Cys
>WENV170276721
CERO01014776
373542
Bacteroidota
GGT
Thr
>WENV170276597
CERO01000612
263886
Bacteroidota
TTG
Gln
>WENV170276708
CERO01013101
139231
Bacteroidota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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