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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170276957
CERO01084716
196239
Gammaproteobacteria
TCT
Arg
>WENV170276776
CERO01026887
105852
Gammaproteobacteria
GAG
Leu
>WENV170276885
CERO01053592
161430
Gammaproteobacteria
CCG
Arg
>WENV170276713
CERO01013741
161665
Gammaproteobacteria
CCG
Arg
>WENV170276789
CERO01030022
458882
Gammaproteobacteria
GCA
Cys
>WENV170276684
CERO01008764
261088
Gammaproteobacteria
GGT
Thr
>WENV170276675
CERO01008350
300046
Gammaproteobacteria
TGT
Thr
>WENV170276880
CERO01048310
19344
Gammaproteobacteria
GGA
Ser
>WENV170276799
CERO01031810
125783
Gammaproteobacteria
GTA
Tyr
>WENV170276954
CERO01084660
260947
Gammaproteobacteria
TTG
Gln
>WENV170276718
CERO01014412
65163
Gammaproteobacteria
CAA
Leu
>WENV170276794
CERO01031327
67355
Gammaproteobacteria
TAA
Leu
>WENV170276743
CERO01018737
161514
Gammaproteobacteria
TCT
Arg
>WENV170276712
CERO01013740
181192
Gammaproteobacteria
GAC
Val
>WENV170276814
CERO01033742
271667
Gammaproteobacteria
TTT
Lys
>WENV170276987
CERO01089296
164285
Gammaproteobacteria
TCG
Arg
>WENV170276676
CERO01008350
124716
Gammaproteobacteria
GTA
Tyr
>WENV170276832
CERO01036545
193317
Gammaproteobacteria
TGG
Pro
>WENV170276783
CERO01027812
161327
Gammaproteobacteria
ACG
Arg
>WENV170276664
CERO01005202
189269
Gammaproteobacteria
CGG
Pro
>WENV170276947
CERO01079591
159512
Gammaproteobacteria
GGG
Pro
>WENV170276973
CERO01087560
159511
Gammaproteobacteria
CCT
Arg
>WENV170276634
CERO01003417
18730
Gammaproteobacteria
GCT
Ser
>WENV170276842
CERO01037086
161938
Gammaproteobacteria
CGG
Pro
>WENV170276979
CERO01088389
271668
Gammaproteobacteria
TGT
Thr
>WENV170276785
CERO01028528
265381
Gammaproteobacteria
GTT
Asn
>WENV170276936
CERO01077705
370629
Gammaproteobacteria
TTT
Lys
>WENV170276975
CERO01087779
3825
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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