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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170277073
CERP01008292
109317
Bacteroidota
CAA
Leu
>WENV170277013
CERP01000937
105453
Bacteroidota
TAG
Leu
>WENV170276990
CERP01000073
266737
Bacteroidota
TTT
Lys
>WENV170276998
CERP01000184
370075
Bacteroidota
CCT
Arg
>WENV170277064
CERP01007089
51705
Bacteroidota
TGA
Ser
>WENV170277030
CERP01003577
105619
Bacteroidota
GTA
Tyr
>WENV170277125
CERP01013006
169559
Bacteroidota
GGG
Pro
>WENV170277100
CERP01010399
138865
Bacteroidota
>WENV170277110
CERP01011567
258133
Bacteroidota
>WENV170277451
CERP01051640
268933
Bacteroidota
>WENV170277099
CERP01010399
68627
Bacteroidota
GCT
Ser
>WENV170277168
CERP01016970
138967
Bacteroidota
TGG
Pro
>WENV170276992
CERP01000102
197208
Bacteroidota
GTT
Asn
>WENV170277114
CERP01011569
267059
Bacteroidota
GAA
Phe
>WENV170277032
CERP01003577
373542
Bacteroidota
GGT
Thr
>WENV170277071
CERP01008290
263886
Bacteroidota
TTG
Gln
>WENV170277331
CERP01039995
188006
Bacteroidota
TCT
Arg
>WENV170277380
CERP01046064
174954
Bacteroidota
GTT
Asn
>WENV170277304
CERP01034814
259269
Bacteroidota
GAA
Phe
>WENV170277002
CERP01000185
158985
Bacteroidota
GTC
Asp
>WENV170277000
CERP01000184
178785
Bacteroidota
>WENV170277072
CERP01008291
19592
Bacteroidota
GGA
Ser
>WENV170277113
CERP01011568
139231
Bacteroidota
GAC
Val
>WENV170277124
CERP01013002
169560
Bacteroidota
GTG
His
>WENV170277323
CERP01039092
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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