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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170293864
CESC01015263
202800
Alphaproteobacteria
ACG
Arg
>WENV170294039
CESC01031398
214179
Alphaproteobacteria
CCT
Arg
>WENV170294158
CESC01043638
290709
Alphaproteobacteria
CCA
Trp
>WENV170293978
CESC01026993
259585
Alphaproteobacteria
CCA
Trp
>WENV170294627
CESC01100947
369482
Alphaproteobacteria
GAC
Val
>WENV170293914
CESC01019205
369985
Alphaproteobacteria
GAA
Phe
>WENV170294255
CESC01054578
469905
Alphaproteobacteria
CCC
Gly
>WENV170294550
CESC01089287
383286
Alphaproteobacteria
GGT
Thr
>WENV170294692
CESC01131873
159287
Alphaproteobacteria
CGG
Pro
>WENV170294453
CESC01078037
171458
Alphaproteobacteria
TCT
Arg
>WENV170294584
CESC01092974
325069
Alphaproteobacteria
TTT
Lys
>WENV170293727
CESC01004223
369406
Alphaproteobacteria
GAC
Val
>WENV170293681
CESC01000782
238723
Alphaproteobacteria
GTG
His
>WENV170294066
CESC01034117
238723
Alphaproteobacteria
GTG
His
>WENV170294581
CESC01092533
67024
Alphaproteobacteria
TAA
Leu
>WENV170294448
CESC01077381
309182
Alphaproteobacteria
TAC
Val
>WENV170294551
CESC01089300
371034
Alphaproteobacteria
GAC
Val
>WENV170294265
CESC01055326
89275
Alphaproteobacteria
GAG
Leu
>WENV170293684
CESC01001140
129121
Alphaproteobacteria
CAA
Leu
>WENV170293918
CESC01019684
26236
Alphaproteobacteria
CGA
Ser
>WENV170294444
CESC01076650
27338
Alphaproteobacteria
CGA
Ser
>WENV170293829
CESC01012621
88722
Alphaproteobacteria
CAG
Leu
>WENV170294029
CESC01030871
231929
Alphaproteobacteria
ACG
Arg
>WENV170293701
CESC01002235
323860
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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