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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170294699
CESC01134498
370833
Bacteroidota
TTG
Gln
>WENV170294838
CESC01169162
213750
Bacteroidota
GTT
Asn
>WENV170294061
CESC01033535
370082
Bacteroidota
GGT
Thr
>WENV170294260
CESC01055087
160350
Bacteroidota
CAT
Met
>WENV170294154
CESC01043242
314601
Bacteroidota
>WENV170294571
CESC01091777
160349
Bacteroidota
GTG
His
>WENV170293683
CESC01001072
172147
Bacteroidota
GGC
Ala
>WENV170293801
CESC01011145
65365
Bacteroidota
GCT
Ser
>WENV170293741
CESC01005899
177164
Bacteroidota
GTC
Asp
>WENV170293997
CESC01028505
171098
Bacteroidota
>WENV170293767
CESC01008349
65096
Bacteroidota
TAA
Leu
>WENV170294754
CESC01151076
370201
Bacteroidota
TTG
Gln
>WENV170294140
CESC01041006
160570
Bacteroidota
TCT
Arg
>WENV170294367
CESC01067906
144149
Bacteroidota
TGG
Pro
>WENV170294113
CESC01038447
71400
Bacteroidota
GCT
Ser
>WENV170293985
CESC01027696
24600
Bacteroidota
GGA
Ser
>WENV170293957
CESC01024420
210921
Bacteroidota
GGC
Ala
>WENV170293685
CESC01001147
23145
Bacteroidota
GGA
Ser
>WENV170294790
CESC01161428
65366
Bacteroidota
GAG
Leu
>WENV170294157
CESC01043242
311172
Bacteroidota
GAA
Phe
>WENV170293984
CESC01027696
325477
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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