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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170293848
CESC01014038
158433
Gammaproteobacteria
ACG
Arg
>WENV170293849
CESC01014038
158433
Gammaproteobacteria
ACG
Arg
>WENV170294569
CESC01091557
158433
Gammaproteobacteria
ACG
Arg
>WENV170294015
CESC01029509
448974
Gammaproteobacteria
GCA
Cys
>WENV170293795
CESC01010836
256881
Gammaproteobacteria
GTG
His
>WENV170294328
CESC01063318
64904
Gammaproteobacteria
CAA
Leu
>WENV170293722
CESC01003793
18367
Gammaproteobacteria
GCT
Ser
>WENV170294508
CESC01084107
263230
Gammaproteobacteria
TTT
Lys
>WENV170294031
CESC01030907
105430
Gammaproteobacteria
GTA
Tyr
>WENV170294223
CESC01049887
161665
Gammaproteobacteria
CCG
Arg
>WENV170294396
CESC01070168
64907
Gammaproteobacteria
GAG
Leu
>WENV170293758
CESC01007956
448854
Gammaproteobacteria
CCC
Gly
>WENV170294310
CESC01060544
319314
Gammaproteobacteria
TGT
Thr
>WENV170294554
CESC01090228
162167
Gammaproteobacteria
CCG
Arg
>WENV170294523
CESC01085935
8977
Gammaproteobacteria
GCT
Ser
>WENV170294318
CESC01061754
161432
Gammaproteobacteria
CAC
Val
>WENV170294019
CESC01029839
221435
Gammaproteobacteria
GGG
Pro
>WENV170294038
CESC01031352
271381
Gammaproteobacteria
GGC
Ala
>WENV170294118
CESC01038660
260947
Gammaproteobacteria
TTG
Gln
>WENV170294377
CESC01068557
260947
Gammaproteobacteria
TTG
Gln
>WENV170294374
CESC01068363
177586
Gammaproteobacteria
TCT
Arg
>WENV170294479
CESC01081374
65163
Gammaproteobacteria
CAA
Leu
>WENV170293970
CESC01026162
67355
Gammaproteobacteria
TAA
Leu
>WENV170294022
CESC01029932
161514
Gammaproteobacteria
TCT
Arg
>WENV170293757
CESC01007535
124716
Gammaproteobacteria
GTA
Tyr
>WENV170294810
CESC01166091
260355
Gammaproteobacteria
TAC
Val
>WENV170293796
CESC01010836
106574
Gammaproteobacteria
TAG
Leu
>WENV170294471
CESC01080123
259140
Gammaproteobacteria
TGC
Ala
>WENV170293907
CESC01018567
128911
Gammaproteobacteria
GTA
Tyr
>WENV170294166
CESC01044274
189269
Gammaproteobacteria
CGG
Pro
>WENV170294454
CESC01078078
105274
Gammaproteobacteria
TAG
Leu
>WENV170294507
CESC01084006
258908
Gammaproteobacteria
CCT
Arg
>WENV170294169
CESC01044604
259521
Gammaproteobacteria
TTG
Gln
>WENV170294776
CESC01157179
284995
Gammaproteobacteria
GTG
His
>WENV170293792
CESC01010754
76260
Gammaproteobacteria
CAG
Leu
>WENV170293793
CESC01010754
76260
Gammaproteobacteria
CAG
Leu
>WENV170293759
CESC01007981
214281
Gammaproteobacteria
ACG
Arg
>WENV170294375
CESC01068363
306475
Gammaproteobacteria
GTG
His
>WENV170294560
CESC01090660
178032
Gammaproteobacteria
GGG
Pro
>WENV170293742
CESC01006145
159512
Gammaproteobacteria
GGG
Pro
>WENV170294419
CESC01073031
159512
Gammaproteobacteria
GGG
Pro
>WENV170293740
CESC01005764
50028
Gammaproteobacteria
GGA
Ser
>WENV170294494
CESC01083312
290512
Gammaproteobacteria
TGT
Thr
>WENV170294153
CESC01043147
67081
Gammaproteobacteria
CAA
Leu
>WENV170293936
CESC01022103
225112
Gammaproteobacteria
GAT
Ile
>WENV170294576
CESC01092097
38291
Gammaproteobacteria
TGA
Ser
>WENV170294539
CESC01088333
258828
Gammaproteobacteria
TGT
Thr
>WENV170294287
CESC01057703
462237
Gammaproteobacteria
GCA
Cys
>WENV170294236
CESC01051398
258349
Gammaproteobacteria
TGT
Thr
>WENV170294179
CESC01046257
261154
Gammaproteobacteria
TGC
Ala
>WENV170294108
CESC01037636
263987
Gammaproteobacteria
TTT
Lys
>WENV170293809
CESC01011558
370629
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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