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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170299507
CESG01039371
160199
Alphaproteobacteria
GGG
Pro
>WENV170299310
CESG01024938
369984
Alphaproteobacteria
TTG
Gln
>WENV170299383
CESG01029849
448544
Alphaproteobacteria
CTG
Gln
>WENV170299509
CESG01039371
160201
Alphaproteobacteria
TGG
Pro
>WENV170299870
CESG01068775
175228
Alphaproteobacteria
CAT
Met
>WENV170299086
CESG01011630
75752
Alphaproteobacteria
CAG
Leu
>WENV170299084
CESG01011485
369985
Alphaproteobacteria
GAA
Phe
>WENV170299312
CESG01025082
193605
Alphaproteobacteria
>WENV170299246
CESG01020873
383286
Alphaproteobacteria
GGT
Thr
>WENV170299247
CESG01020873
448545
Alphaproteobacteria
>WENV170299243
CESG01020727
26326
Alphaproteobacteria
CGA
Ser
>WENV170299332
CESG01026248
160197
Alphaproteobacteria
GTC
Asp
>WENV170300827
CESG01193422
171458
Alphaproteobacteria
TCT
Arg
>WENV170299381
CESG01029848
325069
Alphaproteobacteria
TTT
Lys
>WENV170299191
CESG01017462
238723
Alphaproteobacteria
GTG
His
>WENV170300387
CESG01120400
391624
Alphaproteobacteria
TTG
Gln
>WENV170299387
CESG01029917
105419
Alphaproteobacteria
TAA
Leu
>WENV170299322
CESG01025870
65064
Alphaproteobacteria
GAG
Leu
>WENV170299384
CESG01029849
12053
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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