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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170299402
CESG01030732
448974
Gammaproteobacteria
GCA
Cys
>WENV170300224
CESG01105794
256881
Gammaproteobacteria
GTG
His
>WENV170298941
CESG01002484
64904
Gammaproteobacteria
CAA
Leu
>WENV170300407
CESG01122464
64904
Gammaproteobacteria
CAA
Leu
>WENV170299304
CESG01024771
18367
Gammaproteobacteria
GCT
Ser
>WENV170299450
CESG01034929
105430
Gammaproteobacteria
GTA
Tyr
>WENV170299504
CESG01039290
370759
Gammaproteobacteria
TTG
Gln
>WENV170300257
CESG01108902
64907
Gammaproteobacteria
GAG
Leu
>WENV170299809
CESG01063042
71882
Gammaproteobacteria
TAA
Leu
>WENV170300009
CESG01082585
229608
Gammaproteobacteria
CAT
Met
>WENV170299061
CESG01009474
172986
Gammaproteobacteria
CCA
Trp
>WENV170299209
CESG01018539
172986
Gammaproteobacteria
CCA
Trp
>WENV170300672
CESG01139757
325641
Gammaproteobacteria
CCA
Trp
>WENV170299744
CESG01058702
297257
Gammaproteobacteria
TGC
Ala
>WENV170300225
CESG01105794
106574
Gammaproteobacteria
TAG
Leu
>WENV170299621
CESG01046165
300146
Gammaproteobacteria
>WENV170300336
CESG01114799
323307
Gammaproteobacteria
GGT
Thr
>WENV170299808
CESG01063042
451514
Gammaproteobacteria
GCA
Cys
>WENV170298991
CESG01005567
307111
Gammaproteobacteria
TAC
Val
>WENV170299842
CESG01066299
284995
Gammaproteobacteria
GTG
His
>WENV170299305
CESG01024771
214281
Gammaproteobacteria
ACG
Arg
>WENV170300990
CESG01232220
178032
Gammaproteobacteria
GGG
Pro
>WENV170301005
CESG01233881
159512
Gammaproteobacteria
GGG
Pro
>WENV170300185
CESG01102034
67081
Gammaproteobacteria
CAA
Leu
>WENV170299710
CESG01056221
159511
Gammaproteobacteria
CCT
Arg
>WENV170299394
CESG01030435
225112
Gammaproteobacteria
GAT
Ile
>WENV170299044
CESG01008630
191341
Gammaproteobacteria
CAT
Met
>WENV170300138
CESG01096214
323358
Gammaproteobacteria
GGT
Thr
>WENV170300652
CESG01139438
13081
Gammaproteobacteria
GCT
Ser
>WENV170300211
CESG01104997
65858
Gammaproteobacteria
CAA
Leu
>WENV170299880
CESG01069712
261154
Gammaproteobacteria
TGC
Ala
>WENV170298992
CESG01005567
236600
Gammaproteobacteria
GTC
Asp
>WENV170300242
CESG01107108
220289
Gammaproteobacteria
CAT
Met
>WENV170299153
CESG01016081
159507
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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