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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170309849
CESL01233378
160199
Alphaproteobacteria
GGG
Pro
>WENV170308325
CESL01019258
369984
Alphaproteobacteria
TTG
Gln
>WENV170309841
CESL01231924
369984
Alphaproteobacteria
TTG
Gln
>WENV170309486
CESL01147021
195158
Alphaproteobacteria
GTC
Asp
>WENV170308534
CESL01036262
448085
Alphaproteobacteria
TCC
Gly
>WENV170309101
CESL01098742
280288
Alphaproteobacteria
TGT
Thr
>WENV170309687
CESL01170697
108926
Alphaproteobacteria
GTA
Tyr
>WENV170308319
CESL01018636
448544
Alphaproteobacteria
CTG
Gln
>WENV170308849
CESL01066819
448544
Alphaproteobacteria
CTG
Gln
>WENV170309018
CESL01088224
448544
Alphaproteobacteria
CTG
Gln
>WENV170309813
CESL01222857
108846
Alphaproteobacteria
CAA
Leu
>WENV170308140
CESL01005147
160201
Alphaproteobacteria
TGG
Pro
>WENV170308647
CESL01047149
175228
Alphaproteobacteria
CAT
Met
>WENV170309593
CESL01155923
369985
Alphaproteobacteria
GAA
Phe
>WENV170308678
CESL01049744
31820
Alphaproteobacteria
TGA
Ser
>WENV170308265
CESL01013525
88859
Alphaproteobacteria
GTA
Tyr
>WENV170308233
CESL01011946
383286
Alphaproteobacteria
GGT
Thr
>WENV170309772
CESL01211996
188661
Alphaproteobacteria
CCG
Arg
>WENV170308795
CESL01062141
448545
Alphaproteobacteria
>WENV170309485
CESL01146673
448545
Alphaproteobacteria
>WENV170308548
CESL01037495
382620
Alphaproteobacteria
GCC
Gly
>WENV170309276
CESL01120251
26326
Alphaproteobacteria
CGA
Ser
>WENV170309642
CESL01158078
26326
Alphaproteobacteria
CGA
Ser
>WENV170309391
CESL01136092
395582
Alphaproteobacteria
CTC
Glu
>WENV170309562
CESL01154425
160197
Alphaproteobacteria
GTC
Asp
>WENV170308778
CESL01059932
107829
Alphaproteobacteria
CAA
Leu
>WENV170308977
CESL01080465
382630
Alphaproteobacteria
GAC
Val
>WENV170308404
CESL01024735
173035
Alphaproteobacteria
GTG
His
>WENV170309120
CESL01101345
173035
Alphaproteobacteria
GTG
His
>WENV170309554
CESL01153342
173035
Alphaproteobacteria
GTG
His
>WENV170309622
CESL01157347
161060
Alphaproteobacteria
ACG
Arg
>WENV170309383
CESL01134832
451387
Alphaproteobacteria
TCC
Gly
>WENV170308709
CESL01053011
160575
Alphaproteobacteria
CCT
Arg
>WENV170308559
CESL01038229
172838
Alphaproteobacteria
ACG
Arg
>WENV170308955
CESL01078263
160254
Alphaproteobacteria
CCA
Trp
>WENV170308740
CESL01055301
105419
Alphaproteobacteria
TAA
Leu
>WENV170309308
CESL01124719
65064
Alphaproteobacteria
GAG
Leu
>WENV170309702
CESL01177481
262836
Alphaproteobacteria
TAC
Val
>WENV170308500
CESL01033337
12053
Alphaproteobacteria
GCT
Ser
>WENV170308367
CESL01021989
278105
Alphaproteobacteria
TTT
Lys
>WENV170308417
CESL01025663
278105
Alphaproteobacteria
TTT
Lys
>WENV170308836
CESL01065328
376350
Alphaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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