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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170308586
CESL01041543
277731
Bacteroidota
>WENV170309606
CESL01157027
277731
Bacteroidota
>WENV170308943
CESL01077374
177853
Bacteroidota
GAT
Ile
>WENV170309818
CESL01224140
171373
Bacteroidota
GTG
His
>WENV170309651
CESL01158638
49934
Bacteroidota
TGA
Ser
>WENV170308597
CESL01042859
105453
Bacteroidota
TAG
Leu
>WENV170308819
CESL01063799
370082
Bacteroidota
GGT
Thr
>WENV170309116
CESL01100786
160350
Bacteroidota
CAT
Met
>WENV170308682
CESL01050279
139505
Bacteroidota
TAC
Val
>WENV170308172
CESL01007256
42366
Bacteroidota
TAA
Leu
>WENV170309273
CESL01119845
105619
Bacteroidota
GTA
Tyr
>WENV170308839
CESL01065713
169559
Bacteroidota
GGG
Pro
>WENV170309055
CESL01093419
138865
Bacteroidota
>WENV170308248
CESL01012721
160349
Bacteroidota
GTG
His
>WENV170308681
CESL01050183
160349
Bacteroidota
GTG
His
>WENV170308499
CESL01032916
172147
Bacteroidota
GGC
Ala
>WENV170309380
CESL01134532
160351
Bacteroidota
TCT
Arg
>WENV170308171
CESL01007256
258133
Bacteroidota
>WENV170309458
CESL01143149
170035
Bacteroidota
GTT
Asn
>WENV170308934
CESL01076229
194726
Bacteroidota
TGC
Ala
>WENV170308944
CESL01077374
194726
Bacteroidota
TGC
Ala
>WENV170309322
CESL01126390
194726
Bacteroidota
TGC
Ala
>WENV170309246
CESL01116839
263627
Bacteroidota
TTG
Gln
>WENV170309594
CESL01155980
263627
Bacteroidota
TTG
Gln
>WENV170309646
CESL01158368
263627
Bacteroidota
TTG
Gln
>WENV170308665
CESL01048079
49783
Bacteroidota
TGA
Ser
>WENV170308123
CESL01002934
65096
Bacteroidota
TAA
Leu
>WENV170308599
CESL01042933
144149
Bacteroidota
TGG
Pro
>WENV170308767
CESL01058566
158981
Bacteroidota
GGC
Ala
>WENV170308156
CESL01006594
454104
Bacteroidota
GCA
Cys
>WENV170308454
CESL01028828
370083
Bacteroidota
TTC
Glu
>WENV170309716
CESL01186612
370083
Bacteroidota
TTC
Glu
>WENV170308211
CESL01009959
89188
Bacteroidota
GTA
Tyr
>WENV170309091
CESL01097485
66584
Bacteroidota
GCT
Ser
>WENV170309188
CESL01108814
174954
Bacteroidota
GTT
Asn
>WENV170308722
CESL01054054
67642
Bacteroidota
GAG
Leu
>WENV170308842
CESL01066021
268445
Bacteroidota
GAA
Phe
>WENV170309524
CESL01149812
111503
Bacteroidota
CAA
Leu
>WENV170308899
CESL01072030
158985
Bacteroidota
GTC
Asp
>WENV170308987
CESL01082620
259964
Bacteroidota
>WENV170308727
CESL01054422
89123
Bacteroidota
GCT
Ser
>WENV170309531
CESL01151038
161055
Bacteroidota
TCT
Arg
>WENV170308815
CESL01063611
178785
Bacteroidota
>WENV170308375
CESL01022946
19592
Bacteroidota
GGA
Ser
>WENV170309343
CESL01129615
19592
Bacteroidota
GGA
Ser
>WENV170308391
CESL01023882
139231
Bacteroidota
GAC
Val
>WENV170308961
CESL01078797
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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