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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170308280
CESL01015152
158433
Gammaproteobacteria
ACG
Arg
>WENV170308281
CESL01015152
158433
Gammaproteobacteria
ACG
Arg
>WENV170309638
CESL01157834
448974
Gammaproteobacteria
GCA
Cys
>WENV170308448
CESL01028298
170011
Gammaproteobacteria
CCG
Arg
>WENV170308168
CESL01007079
191632
Gammaproteobacteria
>WENV170308676
CESL01049696
257075
Gammaproteobacteria
GTG
His
>WENV170309385
CESL01134925
108980
Gammaproteobacteria
TAG
Leu
>WENV170309654
CESL01158724
448854
Gammaproteobacteria
CCC
Gly
>WENV170308266
CESL01013544
21308
Gammaproteobacteria
GGA
Ser
>WENV170308313
CESL01018205
21308
Gammaproteobacteria
GGA
Ser
>WENV170308340
CESL01020091
21308
Gammaproteobacteria
GGA
Ser
>WENV170308671
CESL01049306
21308
Gammaproteobacteria
GGA
Ser
>WENV170309226
CESL01113705
18561
Gammaproteobacteria
TGA
Ser
>WENV170308563
CESL01038782
105723
Gammaproteobacteria
GAG
Leu
>WENV170309541
CESL01152554
50077
Gammaproteobacteria
GGA
Ser
>WENV170308583
CESL01041253
172986
Gammaproteobacteria
CCA
Trp
>WENV170308654
CESL01047403
172986
Gammaproteobacteria
CCA
Trp
>WENV170309509
CESL01148359
272540
Gammaproteobacteria
GTT
Asn
>WENV170308294
CESL01016435
112932
Gammaproteobacteria
GAG
Leu
>WENV170309072
CESL01095561
112932
Gammaproteobacteria
GAG
Leu
>WENV170309247
CESL01116938
112932
Gammaproteobacteria
GAG
Leu
>WENV170308674
CESL01049696
193317
Gammaproteobacteria
TGG
Pro
>WENV170309138
CESL01103507
181298
Gammaproteobacteria
>WENV170309058
CESL01093631
107578
Gammaproteobacteria
GAG
Leu
>WENV170308339
CESL01020066
259140
Gammaproteobacteria
TGC
Ala
>WENV170309454
CESL01142654
159335
Gammaproteobacteria
CAT
Met
>WENV170308533
CESL01036240
263347
Gammaproteobacteria
TTT
Lys
>WENV170309377
CESL01134211
263347
Gammaproteobacteria
TTT
Lys
>WENV170308177
CESL01007664
159341
Gammaproteobacteria
GAT
Ile
>WENV170309563
CESL01154493
105140
Gammaproteobacteria
TAG
Leu
>WENV170309643
CESL01158235
258908
Gammaproteobacteria
CCT
Arg
>WENV170309510
CESL01148359
161939
Gammaproteobacteria
GAC
Val
>WENV170309545
CESL01152995
50028
Gammaproteobacteria
GGA
Ser
>WENV170308235
CESL01012269
290512
Gammaproteobacteria
TGT
Thr
>WENV170309608
CESL01157156
191341
Gammaproteobacteria
CAT
Met
>WENV170309372
CESL01133350
452315
Gammaproteobacteria
GCA
Cys
>WENV170308498
CESL01032545
161319
Gammaproteobacteria
>WENV170309577
CESL01154989
65858
Gammaproteobacteria
CAA
Leu
>WENV170308892
CESL01071302
263987
Gammaproteobacteria
TTT
Lys
>WENV170308893
CESL01071302
263987
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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