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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170324118
CESS01052020
211884
Bacteroidota
TGC
Ala
>WENV170324842
CESS01142134
144149
Bacteroidota
TGG
Pro
>WENV170323668
CESS01015524
71400
Bacteroidota
GCT
Ser
>WENV170323936
CESS01037696
168483
Bacteroidota
GTT
Asn
>WENV170324003
CESS01043119
310118
Bacteroidota
CCA
Trp
>WENV170324133
CESS01053090
310118
Bacteroidota
CCA
Trp
>WENV170324188
CESS01059167
310118
Bacteroidota
CCA
Trp
>WENV170323622
CESS01012921
18750
Bacteroidota
GGA
Ser
>WENV170324944
CESS01169872
451380
Bacteroidota
GCA
Cys
>WENV170323658
CESS01014983
65708
Bacteroidota
GCT
Ser
>WENV170324365
CESS01076277
301008
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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