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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170323732
CESS01020676
400868
Cyanobacteriota
TTG
Gln
>WENV170323987
CESS01042050
400868
Cyanobacteriota
TTG
Gln
>WENV170324971
CESS01176817
105782
Cyanobacteriota
AAG
Leu
>WENV170323671
CESS01015699
260661
Cyanobacteriota
>WENV170324460
CESS01085071
107678
Cyanobacteriota
GTA
Tyr
>WENV170324245
CESS01064468
108944
Cyanobacteriota
GTA
Tyr
>WENV170323731
CESS01020674
29220
Cyanobacteriota
CGA
Ser
>WENV170324039
CESS01045683
160110
Cyanobacteriota
CCG
Arg
>WENV170323679
CESS01016013
370838
Cyanobacteriota
CCC
Gly
>WENV170323624
CESS01012965
89063
Cyanobacteriota
TAG
Leu
>WENV170323466
CESS01002175
161711
Cyanobacteriota
GTC
Asp
>WENV170323688
CESS01016749
161711
Cyanobacteriota
GTC
Asp
>WENV170323997
CESS01042692
161711
Cyanobacteriota
GTC
Asp
>WENV170324145
CESS01054389
182044
Cyanobacteriota
GTC
Asp
>WENV170324828
CESS01138035
105816
Cyanobacteriota
CAG
Leu
>WENV170323509
CESS01004483
270573
Cyanobacteriota
GTG
His
>WENV170323521
CESS01005448
160107
Cyanobacteriota
CAT
Met
>WENV170324651
CESS01096047
160107
Cyanobacteriota
CAT
Met
>WENV170323450
CESS01000582
399462
Cyanobacteriota
GTT
Asn
>WENV170323687
CESS01016749
258993
Cyanobacteriota
CCA
Trp
>WENV170323498
CESS01004082
161710
Cyanobacteriota
ACG
Arg
>WENV170323872
CESS01032669
210553
Cyanobacteriota
CCG
Arg
>WENV170323469
CESS01002299
375129
Cyanobacteriota
TTG
Gln
>WENV170324144
CESS01054339
114789
Cyanobacteriota
TAG
Leu
>WENV170324668
CESS01096479
369944
Cyanobacteriota
GAC
Val
>WENV170324218
CESS01062150
448924
Cyanobacteriota
TCC
Gly
>WENV170324193
CESS01059793
28527
Cyanobacteriota
CGA
Ser
>WENV170323495
CESS01003919
117365
Cyanobacteriota
TAG
Leu
>WENV170323691
CESS01016967
284834
Cyanobacteriota
CGC
Ala
>WENV170323891
CESS01034048
369938
Cyanobacteriota
GTT
Asn
>WENV170324194
CESS01059893
267587
Cyanobacteriota
>WENV170323579
CESS01009582
161840
Cyanobacteriota
TCT
Arg
>WENV170323608
CESS01011407
105817
Cyanobacteriota
CAA
Leu
>WENV170324496
CESS01087539
65386
Cyanobacteriota
CAG
Leu
>WENV170323930
CESS01037374
370924
Cyanobacteriota
CCC
Gly
>WENV170323485
CESS01003008
161765
Cyanobacteriota
CAT
Met
>WENV170324073
CESS01048692
105814
Cyanobacteriota
TAG
Leu
>WENV170323590
CESS01010348
370841
Cyanobacteriota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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