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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170325468
CEST01021840
275643
Alphaproteobacteria
TTT
Lys
>WENV170325713
CEST01046182
453062
Alphaproteobacteria
CCC
Gly
>WENV170326095
CEST01087201
259585
Alphaproteobacteria
CCA
Trp
>WENV170325247
CEST01006118
125595
Alphaproteobacteria
>WENV170325298
CEST01009279
89072
Alphaproteobacteria
GAG
Leu
>WENV170326012
CEST01083332
393349
Alphaproteobacteria
GGT
Thr
>WENV170326193
CEST01143478
162317
Alphaproteobacteria
GTC
Asp
>WENV170325809
CEST01058773
377113
Alphaproteobacteria
GAC
Val
>WENV170325344
CEST01012283
371034
Alphaproteobacteria
GAC
Val
>WENV170325716
CEST01046384
178940
Alphaproteobacteria
GGG
Pro
>WENV170325890
CEST01069438
163875
Alphaproteobacteria
ACG
Arg
>WENV170325718
CEST01046614
449739
Alphaproteobacteria
GCA
Cys
>WENV170325548
CEST01031529
163583
Alphaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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