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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170325209
CEST01003045
168329
Bacteroidota
CAT
Met
>WENV170325831
CEST01061664
168329
Bacteroidota
CAT
Met
>WENV170326037
CEST01085599
168329
Bacteroidota
CAT
Met
>WENV170325210
CEST01003045
292540
Bacteroidota
TCC
Gly
>WENV170325625
CEST01035183
177853
Bacteroidota
GAT
Ile
>WENV170325340
CEST01011794
257688
Bacteroidota
>WENV170325279
CEST01008213
165596
Bacteroidota
GGC
Ala
>WENV170325480
CEST01023076
139596
Bacteroidota
TGG
Pro
>WENV170325723
CEST01047057
139596
Bacteroidota
TGG
Pro
>WENV170325338
CEST01011144
105453
Bacteroidota
TAG
Leu
>WENV170325653
CEST01038000
105453
Bacteroidota
TAG
Leu
>WENV170326092
CEST01087172
105453
Bacteroidota
TAG
Leu
>WENV170326099
CEST01087291
105453
Bacteroidota
TAG
Leu
>WENV170325270
CEST01007651
124676
Bacteroidota
GTA
Tyr
>WENV170326004
CEST01082594
258741
Bacteroidota
TCC
Gly
>WENV170325430
CEST01019096
369213
Bacteroidota
GCC
Gly
>WENV170326145
CEST01117545
449969
Bacteroidota
GCA
Cys
>WENV170325239
CEST01005205
258742
Bacteroidota
TTT
Lys
>WENV170325410
CEST01017537
258742
Bacteroidota
TTT
Lys
>WENV170325932
CEST01074979
258742
Bacteroidota
TTT
Lys
>WENV170325962
CEST01079471
258742
Bacteroidota
TTT
Lys
>WENV170325973
CEST01080425
258742
Bacteroidota
TTT
Lys
>WENV170326075
CEST01086820
258742
Bacteroidota
TTT
Lys
>WENV170325448
CEST01020429
49704
Bacteroidota
TGA
Ser
>WENV170325346
CEST01012358
188934
Bacteroidota
>WENV170325397
CEST01016698
188934
Bacteroidota
>WENV170325590
CEST01033252
105619
Bacteroidota
GTA
Tyr
>WENV170325593
CEST01033303
105619
Bacteroidota
GTA
Tyr
>WENV170325258
CEST01007060
12157
Bacteroidota
GCT
Ser
>WENV170326081
CEST01086974
108836
Bacteroidota
GCT
Ser
>WENV170326060
CEST01086470
385890
Bacteroidota
TTC
Glu
>WENV170325741
CEST01049304
197698
Bacteroidota
>WENV170325189
CEST01001699
194726
Bacteroidota
TGC
Ala
>WENV170325253
CEST01006613
194726
Bacteroidota
TGC
Ala
>WENV170325315
CEST01009709
194726
Bacteroidota
TGC
Ala
>WENV170325626
CEST01035183
194726
Bacteroidota
TGC
Ala
>WENV170325495
CEST01025627
177164
Bacteroidota
GTC
Asp
>WENV170325955
CEST01078256
144149
Bacteroidota
TGG
Pro
>WENV170325466
CEST01021635
371113
Bacteroidota
CCA
Trp
>WENV170325655
CEST01038320
372822
Bacteroidota
GCC
Gly
>WENV170325272
CEST01007651
373542
Bacteroidota
GGT
Thr
>WENV170325592
CEST01033252
373542
Bacteroidota
GGT
Thr
>WENV170325595
CEST01033303
373542
Bacteroidota
GGT
Thr
>WENV170325431
CEST01019096
41789
Bacteroidota
TAA
Leu
>WENV170325963
CEST01079475
265540
Bacteroidota
GAA
Phe
>WENV170326062
CEST01086613
265540
Bacteroidota
GAA
Phe
>WENV170326082
CEST01087070
265540
Bacteroidota
GAA
Phe
>WENV170326096
CEST01087216
369841
Bacteroidota
>WENV170325493
CEST01025446
168483
Bacteroidota
GTT
Asn
>WENV170326191
CEST01143008
139749
Bacteroidota
TAC
Val
>WENV170325442
CEST01019714
66584
Bacteroidota
GCT
Ser
>WENV170325314
CEST01009709
160456
Bacteroidota
GAT
Ile
>WENV170325417
CEST01017866
259269
Bacteroidota
GAA
Phe
>WENV170325556
CEST01032080
452385
Bacteroidota
GCA
Cys
>WENV170325549
CEST01031627
369215
Bacteroidota
TTC
Glu
>WENV170326015
CEST01083807
369215
Bacteroidota
TTC
Glu
>WENV170325646
CEST01037535
111503
Bacteroidota
CAA
Leu
>WENV170325843
CEST01063552
111503
Bacteroidota
CAA
Leu
>WENV170325236
CEST01004918
158985
Bacteroidota
GTC
Asp
>WENV170325237
CEST01004919
158985
Bacteroidota
GTC
Asp
>WENV170325804
CEST01057607
158985
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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