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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170326748
CESU01017757
146962
Bacteroidota
CAT
Met
>WENV170326577
CESU01008346
139286
Bacteroidota
TGG
Pro
>WENV170327004
CESU01037957
139286
Bacteroidota
TGG
Pro
>WENV170327290
CESU01063556
139286
Bacteroidota
TGG
Pro
>WENV170326951
CESU01034325
306609
Bacteroidota
GAA
Phe
>WENV170327133
CESU01046909
306609
Bacteroidota
GAA
Phe
>WENV170327089
CESU01044012
137224
Bacteroidota
TGG
Pro
>WENV170327049
CESU01041027
309582
Bacteroidota
TTT
Lys
>WENV170327676
CESU01101202
309582
Bacteroidota
TTT
Lys
>WENV170326427
CESU01000915
172532
Bacteroidota
GTC
Asp
>WENV170326428
CESU01000915
172532
Bacteroidota
GTC
Asp
>WENV170326516
CESU01006073
172532
Bacteroidota
GTC
Asp
>WENV170327669
CESU01100272
103881
Bacteroidota
TAG
Leu
>WENV170327032
CESU01039298
103881
Bacteroidota
TAG
Leu
>WENV170327283
CESU01062606
81938
Bacteroidota
GAG
Leu
>WENV170327769
CESU01105159
127458
Bacteroidota
GAC
Val
>WENV170327142
CESU01047913
127458
Bacteroidota
GAC
Val
>WENV170327018
CESU01038509
127458
Bacteroidota
GAC
Val
>WENV170326570
CESU01007990
127458
Bacteroidota
GAC
Val
>WENV170326445
CESU01001640
127458
Bacteroidota
GAC
Val
>WENV170327597
CESU01096401
364423
Bacteroidota
GGT
Thr
>WENV170326818
CESU01022706
364423
Bacteroidota
GGT
Thr
>WENV170328049
CESU01183475
151405
Bacteroidota
TGC
Ala
>WENV170327518
CESU01088626
241347
Bacteroidota
TTG
Gln
>WENV170326696
CESU01014725
241347
Bacteroidota
TTG
Gln
>WENV170326441
CESU01001456
241347
Bacteroidota
TTG
Gln
>WENV170328051
CESU01184070
146800
Bacteroidota
>WENV170327505
CESU01086414
369129
Bacteroidota
TTC
Glu
>WENV170326482
CESU01004037
273242
Bacteroidota
CCA
Trp
>WENV170326697
CESU01014725
45519
Bacteroidota
GGA
Ser
>WENV170327282
CESU01062606
235936
Bacteroidota
TTT
Lys
>WENV170327523
CESU01088875
127414
Bacteroidota
TGG
Pro
>WENV170327498
CESU01085486
127414
Bacteroidota
TGG
Pro
>WENV170327358
CESU01070651
127414
Bacteroidota
TGG
Pro
>WENV170327511
CESU01087029
238764
Bacteroidota
>WENV170327544
CESU01091461
197066
Bacteroidota
GTT
Asn
>WENV170326915
CESU01031289
197066
Bacteroidota
GTT
Asn
>WENV170327684
CESU01101706
190649
Bacteroidota
GTT
Asn
>WENV170326447
CESU01001705
46876
Bacteroidota
TGA
Ser
>WENV170327796
CESU01105930
320640
Bacteroidota
TTG
Gln
>WENV170326862
CESU01026637
320640
Bacteroidota
TTG
Gln
>WENV170327183
CESU01051330
235935
Bacteroidota
TCC
Gly
>WENV170326840
CESU01025049
235935
Bacteroidota
TCC
Gly
>WENV170326791
CESU01021417
235935
Bacteroidota
TCC
Gly
>WENV170326566
CESU01007847
17496
Bacteroidota
GGA
Ser
>WENV170326585
CESU01008855
235802
Bacteroidota
CAT
Met
>WENV170327842
CESU01107179
341187
Bacteroidota
TTG
Gln
>WENV170326822
CESU01023550
341187
Bacteroidota
TTG
Gln
>WENV170327738
CESU01104083
59930
Bacteroidota
GCT
Ser
>WENV170326479
CESU01003473
309421
Bacteroidota
TCC
Gly
>WENV170327433
CESU01078637
145512
Bacteroidota
CAT
Met
>WENV170327605
CESU01096603
97383
Bacteroidota
CAA
Leu
>WENV170327030
CESU01038996
176463
Bacteroidota
TCT
Arg
>WENV170327717
CESU01103246
199382
Bacteroidota
GTT
Asn
>WENV170327386
CESU01075545
145555
Bacteroidota
GTC
Asp
>WENV170327056
CESU01041886
145555
Bacteroidota
GTC
Asp
>WENV170326973
CESU01036668
145555
Bacteroidota
GTC
Asp
>WENV170326420
CESU01000695
145555
Bacteroidota
GTC
Asp
>WENV170326413
CESU01000371
145555
Bacteroidota
GTC
Asp
>WENV170327884
CESU01117442
153768
Bacteroidota
TGC
Ala
>WENV170327222
CESU01055954
49675
Bacteroidota
TGA
Ser
>WENV170327482
CESU01084182
240620
Bacteroidota
GCC
Gly
>WENV170327868
CESU01107468
127449
Bacteroidota
TAC
Val
>WENV170327074
CESU01042570
127449
Bacteroidota
TAC
Val
>WENV170327446
CESU01079749
103368
Bacteroidota
CAA
Leu
>WENV170327649
CESU01098880
193473
Bacteroidota
GTC
Asp
>WENV170326742
CESU01017362
193473
Bacteroidota
GTC
Asp
>WENV170326678
CESU01014457
101289
Bacteroidota
GTA
Tyr
>WENV170326464
CESU01002379
101289
Bacteroidota
GTA
Tyr
>WENV170327592
CESU01095864
127216
Bacteroidota
GGG
Pro
>WENV170328021
CESU01174716
110457
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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