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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170331402
CESW01056141
160199
Alphaproteobacteria
GGG
Pro
>WENV170332565
CESW01222439
448544
Alphaproteobacteria
CTG
Gln
>WENV170332458
CESW01167845
114135
Alphaproteobacteria
GTA
Tyr
>WENV170331726
CESW01086637
212253
Alphaproteobacteria
>WENV170331592
CESW01074491
259585
Alphaproteobacteria
CCA
Trp
>WENV170332630
CESW01247548
32838
Alphaproteobacteria
GCT
Ser
>WENV170330908
CESW01011929
369566
Alphaproteobacteria
GGT
Thr
>WENV170331979
CESW01117279
393349
Alphaproteobacteria
GGT
Thr
>WENV170332150
CESW01136458
393349
Alphaproteobacteria
GGT
Thr
>WENV170331989
CESW01118055
31820
Alphaproteobacteria
TGA
Ser
>WENV170332505
CESW01194026
448970
Alphaproteobacteria
CCC
Gly
>WENV170331133
CESW01030103
406246
Alphaproteobacteria
GCC
Gly
>WENV170331634
CESW01078779
207103
Alphaproteobacteria
GTG
His
>WENV170332314
CESW01146330
205335
Alphaproteobacteria
GGG
Pro
>WENV170330926
CESW01013893
206322
Alphaproteobacteria
GTC
Asp
>WENV170332511
CESW01195225
372766
Alphaproteobacteria
TTG
Gln
>WENV170331652
CESW01080209
26306
Alphaproteobacteria
TGA
Ser
>WENV170331076
CESW01024989
449739
Alphaproteobacteria
GCA
Cys
>WENV170331080
CESW01025162
233224
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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