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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170332201
CESW01139891
277731
Bacteroidota
>WENV170330933
CESW01014267
369213
Bacteroidota
GCC
Gly
>WENV170331150
CESW01031272
139505
Bacteroidota
TAC
Val
>WENV170331970
CESW01116483
106605
Bacteroidota
CAA
Leu
>WENV170332349
CESW01147840
139484
Bacteroidota
TAC
Val
>WENV170331658
CESW01080462
211884
Bacteroidota
TGC
Ala
>WENV170332247
CESW01142187
57357
Bacteroidota
TGA
Ser
>WENV170332290
CESW01145511
160349
Bacteroidota
GTG
His
>WENV170331263
CESW01042337
385890
Bacteroidota
TTC
Glu
>WENV170330799
CESW01002288
310696
Bacteroidota
CCA
Trp
>WENV170332549
CESW01213541
448855
Bacteroidota
GCA
Cys
>WENV170330996
CESW01018811
263627
Bacteroidota
TTG
Gln
>WENV170331213
CESW01037642
177164
Bacteroidota
GTC
Asp
>WENV170331538
CESW01069206
177164
Bacteroidota
GTC
Asp
>WENV170332282
CESW01145155
177164
Bacteroidota
GTC
Asp
>WENV170331719
CESW01085745
188048
Bacteroidota
GGC
Ala
>WENV170331218
CESW01037973
144149
Bacteroidota
TGG
Pro
>WENV170331950
CESW01112499
144149
Bacteroidota
TGG
Pro
>WENV170331962
CESW01114794
144149
Bacteroidota
TGG
Pro
>WENV170332376
CESW01148640
144149
Bacteroidota
TGG
Pro
>WENV170331152
CESW01031287
263162
Bacteroidota
GGG
Pro
>WENV170330925
CESW01013753
321470
Bacteroidota
GAA
Phe
>WENV170331190
CESW01034474
321470
Bacteroidota
GAA
Phe
>WENV170331864
CESW01102019
321470
Bacteroidota
GAA
Phe
>WENV170332237
CESW01141747
321470
Bacteroidota
GAA
Phe
>WENV170331659
CESW01080481
71400
Bacteroidota
GCT
Ser
>WENV170330848
CESW01006540
168483
Bacteroidota
GTT
Asn
>WENV170331037
CESW01021799
168483
Bacteroidota
GTT
Asn
>WENV170331431
CESW01058605
263886
Bacteroidota
TTG
Gln
>WENV170331798
CESW01094161
152195
Bacteroidota
TAC
Val
>WENV170330874
CESW01008502
310118
Bacteroidota
CCA
Trp
>WENV170331074
CESW01024920
310118
Bacteroidota
CCA
Trp
>WENV170332277
CESW01145008
310118
Bacteroidota
CCA
Trp
>WENV170332106
CESW01132174
160456
Bacteroidota
GAT
Ile
>WENV170331931
CESW01109613
23145
Bacteroidota
GGA
Ser
>WENV170331128
CESW01029526
311172
Bacteroidota
GAA
Phe
>WENV170331982
CESW01117331
325477
Bacteroidota
TTG
Gln
>WENV170331407
CESW01056297
259964
Bacteroidota
>WENV170331547
CESW01070324
301008
Bacteroidota
TTG
Gln
>WENV170331131
CESW01030064
89123
Bacteroidota
GCT
Ser
>WENV170330864
CESW01007892
139231
Bacteroidota
GAC
Val
>WENV170330793
CESW01001730
60145
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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