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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170331235
CESW01040149
477494
Gammaproteobacteria
TCC
Gly
>WENV170332502
CESW01191946
65310
Gammaproteobacteria
CAG
Leu
>WENV170331814
CESW01096358
108980
Gammaproteobacteria
TAG
Leu
>WENV170332438
CESW01157845
263230
Gammaproteobacteria
TTT
Lys
>WENV170330889
CESW01009871
65736
Gammaproteobacteria
TAA
Leu
>WENV170331000
CESW01019084
65736
Gammaproteobacteria
TAA
Leu
>WENV170331291
CESW01044291
65736
Gammaproteobacteria
TAA
Leu
>WENV170331743
CESW01088381
65736
Gammaproteobacteria
TAA
Leu
>WENV170331946
CESW01112124
65736
Gammaproteobacteria
TAA
Leu
>WENV170332068
CESW01127794
65736
Gammaproteobacteria
TAA
Leu
>WENV170332193
CESW01139654
65736
Gammaproteobacteria
TAA
Leu
>WENV170332373
CESW01148580
65736
Gammaproteobacteria
TAA
Leu
>WENV170331493
CESW01064996
21308
Gammaproteobacteria
GGA
Ser
>WENV170331890
CESW01105205
181192
Gammaproteobacteria
GAC
Val
>WENV170331568
CESW01071528
325641
Gammaproteobacteria
CCA
Trp
>WENV170332135
CESW01135615
198774
Gammaproteobacteria
GGG
Pro
>WENV170330833
CESW01005476
323307
Gammaproteobacteria
GGT
Thr
>WENV170331075
CESW01024926
218763
Gammaproteobacteria
CAT
Met
>WENV170331318
CESW01048138
282654
Gammaproteobacteria
GGC
Ala
>WENV170331091
CESW01026245
226622
Gammaproteobacteria
GAC
Val
>WENV170330857
CESW01007394
471753
Gammaproteobacteria
GCA
Cys
>WENV170330905
CESW01011441
471753
Gammaproteobacteria
GCA
Cys
>WENV170330919
CESW01013220
471753
Gammaproteobacteria
GCA
Cys
>WENV170330999
CESW01019084
471753
Gammaproteobacteria
GCA
Cys
>WENV170331027
CESW01021206
471753
Gammaproteobacteria
GCA
Cys
>WENV170331290
CESW01044291
471753
Gammaproteobacteria
GCA
Cys
>WENV170331381
CESW01053398
471753
Gammaproteobacteria
GCA
Cys
>WENV170331530
CESW01068449
471753
Gammaproteobacteria
GCA
Cys
>WENV170331569
CESW01071588
471753
Gammaproteobacteria
GCA
Cys
>WENV170331742
CESW01088381
471753
Gammaproteobacteria
GCA
Cys
>WENV170332090
CESW01129340
471753
Gammaproteobacteria
GCA
Cys
>WENV170332214
CESW01140745
471753
Gammaproteobacteria
GCA
Cys
>WENV170332279
CESW01145037
471753
Gammaproteobacteria
GCA
Cys
>WENV170332472
CESW01176893
225112
Gammaproteobacteria
GAT
Ile
>WENV170332067
CESW01127491
161088
Gammaproteobacteria
ACG
Arg
>WENV170330832
CESW01005476
105812
Gammaproteobacteria
GTA
Tyr
>WENV170332675
CESW01256564
323358
Gammaproteobacteria
GGT
Thr
>WENV170332442
CESW01159088
64842
Gammaproteobacteria
CAA
Leu
>WENV170332596
CESW01235416
449736
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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