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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170333543
CESY01059545
283668
Gammaproteobacteria
TTT
Lys
>WENV170333092
CESY01005864
185163
Gammaproteobacteria
ACG
Arg
>WENV170333093
CESY01005864
185163
Gammaproteobacteria
ACG
Arg
>WENV170333884
CESY01100619
149036
Gammaproteobacteria
CCA
Trp
>WENV170333089
CESY01005649
412799
Gammaproteobacteria
GCA
Cys
>WENV170333627
CESY01069786
340801
Gammaproteobacteria
CCT
Arg
>WENV170334270
CESY01153128
237412
Gammaproteobacteria
TAC
Val
>WENV170333091
CESY01005864
10767
Gammaproteobacteria
GCT
Ser
>WENV170333125
CESY01008532
250885
Gammaproteobacteria
TGC
Ala
>WENV170333961
CESY01112377
425813
Gammaproteobacteria
GCA
Cys
>WENV170334354
CESY01164414
149037
Gammaproteobacteria
GAC
Val
>WENV170333096
CESY01006090
101786
Gammaproteobacteria
GAG
Leu
>WENV170334384
CESY01172441
147112
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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