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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170341396
CETD01003161
477494
Gammaproteobacteria
TCC
Gly
>WENV170341862
CETD01046338
309075
Gammaproteobacteria
GTT
Asn
>WENV170341531
CETD01015785
319314
Gammaproteobacteria
TGT
Thr
>WENV170341397
CETD01003161
275093
Gammaproteobacteria
GGT
Thr
>WENV170342236
CETD01093726
221435
Gammaproteobacteria
GGG
Pro
>WENV170342120
CETD01079299
451853
Gammaproteobacteria
GCA
Cys
>WENV170341583
CETD01020494
172986
Gammaproteobacteria
CCA
Trp
>WENV170342038
CETD01068067
172986
Gammaproteobacteria
CCA
Trp
>WENV170342415
CETD01120573
471753
Gammaproteobacteria
GCA
Cys
>WENV170343152
CETD01319931
471753
Gammaproteobacteria
GCA
Cys
>WENV170342097
CETD01076548
65858
Gammaproteobacteria
CAA
Leu
>WENV170341727
CETD01035435
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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