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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170349088
CETH01007901
139505
Bacteroidota
TAC
Val
>WENV170349495
CETH01026751
50545
Bacteroidota
TAA
Leu
>WENV170351227
CETH01135732
263627
Bacteroidota
TTG
Gln
>WENV170349410
CETH01022409
119207
Bacteroidota
TAG
Leu
>WENV170349641
CETH01033869
119207
Bacteroidota
TAG
Leu
>WENV170349835
CETH01046219
50353
Bacteroidota
TGA
Ser
>WENV170349787
CETH01043815
232558
Bacteroidota
TGT
Thr
>WENV170349136
CETH01009461
310118
Bacteroidota
CCA
Trp
>WENV170349144
CETH01009889
310118
Bacteroidota
CCA
Trp
>WENV170349580
CETH01030254
310118
Bacteroidota
CCA
Trp
>WENV170350351
CETH01077215
310118
Bacteroidota
CCA
Trp
>WENV170351578
CETH01156382
18750
Bacteroidota
GGA
Ser
>WENV170351199
CETH01133798
325477
Bacteroidota
TTG
Gln
>WENV170350006
CETH01056295
301008
Bacteroidota
TTG
Gln
>WENV170350703
CETH01099297
301008
Bacteroidota
TTG
Gln
>WENV170349813
CETH01045262
60145
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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