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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170352730
CETH01331480
257895
Gammaproteobacteria
TTT
Lys
>WENV170349691
CETH01037180
256881
Gammaproteobacteria
GTG
His
>WENV170350424
CETH01080512
18367
Gammaproteobacteria
GCT
Ser
>WENV170350277
CETH01072977
309075
Gammaproteobacteria
GTT
Asn
>WENV170351445
CETH01149807
261853
Gammaproteobacteria
GTT
Asn
>WENV170350227
CETH01070040
319314
Gammaproteobacteria
TGT
Thr
>WENV170352949
CETH01408481
230238
Gammaproteobacteria
TGG
Pro
>WENV170349202
CETH01012311
65736
Gammaproteobacteria
TAA
Leu
>WENV170350336
CETH01076373
65736
Gammaproteobacteria
TAA
Leu
>WENV170350410
CETH01079221
65736
Gammaproteobacteria
TAA
Leu
>WENV170351295
CETH01140490
65736
Gammaproteobacteria
TAA
Leu
>WENV170351524
CETH01154139
271191
Gammaproteobacteria
CCA
Trp
>WENV170348989
CETH01002844
229608
Gammaproteobacteria
CAT
Met
>WENV170350917
CETH01114198
451853
Gammaproteobacteria
GCA
Cys
>WENV170349999
CETH01055966
172986
Gammaproteobacteria
CCA
Trp
>WENV170350947
CETH01116232
325641
Gammaproteobacteria
CCA
Trp
>WENV170351852
CETH01170475
325641
Gammaproteobacteria
CCA
Trp
>WENV170351894
CETH01172468
325641
Gammaproteobacteria
CCA
Trp
>WENV170352538
CETH01228539
164285
Gammaproteobacteria
TCG
Arg
>WENV170349844
CETH01046642
448070
Gammaproteobacteria
GCA
Cys
>WENV170349692
CETH01037180
106574
Gammaproteobacteria
TAG
Leu
>WENV170349878
CETH01048962
107578
Gammaproteobacteria
GAG
Leu
>WENV170352695
CETH01315508
128911
Gammaproteobacteria
GTA
Tyr
>WENV170351437
CETH01149139
26187
Gammaproteobacteria
GGA
Ser
>WENV170350043
CETH01058688
271641
Gammaproteobacteria
TGC
Ala
>WENV170350001
CETH01056003
323307
Gammaproteobacteria
GGT
Thr
>WENV170350600
CETH01092151
263347
Gammaproteobacteria
TTT
Lys
>WENV170350425
CETH01080512
214281
Gammaproteobacteria
ACG
Arg
>WENV170350426
CETH01080512
214281
Gammaproteobacteria
ACG
Arg
>WENV170350427
CETH01080512
214281
Gammaproteobacteria
ACG
Arg
>WENV170351345
CETH01143309
290512
Gammaproteobacteria
TGT
Thr
>WENV170352102
CETH01179252
67081
Gammaproteobacteria
CAA
Leu
>WENV170349716
CETH01039231
471753
Gammaproteobacteria
GCA
Cys
>WENV170350531
CETH01087910
471753
Gammaproteobacteria
GCA
Cys
>WENV170350769
CETH01104038
471753
Gammaproteobacteria
GCA
Cys
>WENV170348937
CETH01000184
225112
Gammaproteobacteria
GAT
Ile
>WENV170349482
CETH01026014
105812
Gammaproteobacteria
GTA
Tyr
>WENV170350000
CETH01056003
105812
Gammaproteobacteria
GTA
Tyr
>WENV170351175
CETH01131544
105812
Gammaproteobacteria
GTA
Tyr
>WENV170351304
CETH01141010
105812
Gammaproteobacteria
GTA
Tyr
>WENV170352198
CETH01181190
26256
Gammaproteobacteria
CGA
Ser
>WENV170353029
CETH01429694
161319
Gammaproteobacteria
>WENV170350718
CETH01100272
65858
Gammaproteobacteria
CAA
Leu
>WENV170349263
CETH01015403
265381
Gammaproteobacteria
GTT
Asn
>WENV170349994
CETH01055755
265381
Gammaproteobacteria
GTT
Asn
>WENV170350397
CETH01078522
265381
Gammaproteobacteria
GTT
Asn
>WENV170351975
CETH01175024
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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