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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170366259
CETO01047536
195158
Alphaproteobacteria
GTC
Asp
>WENV170366494
CETO01070359
448544
Alphaproteobacteria
CTG
Gln
>WENV170366879
CETO01145318
259585
Alphaproteobacteria
CCA
Trp
>WENV170366277
CETO01048791
448621
Alphaproteobacteria
GCA
Cys
>WENV170366431
CETO01066150
32838
Alphaproteobacteria
GCT
Ser
>WENV170366243
CETO01045222
369985
Alphaproteobacteria
GAA
Phe
>WENV170366782
CETO01106514
130362
Alphaproteobacteria
CAA
Leu
>WENV170366770
CETO01101668
169712
Alphaproteobacteria
TGG
Pro
>WENV170366680
CETO01086596
31820
Alphaproteobacteria
TGA
Ser
>WENV170366187
CETO01040806
259563
Alphaproteobacteria
GGC
Ala
>WENV170366012
CETO01023145
383286
Alphaproteobacteria
GGT
Thr
>WENV170366443
CETO01067182
448545
Alphaproteobacteria
>WENV170366516
CETO01072421
448545
Alphaproteobacteria
>WENV170366796
CETO01110226
462157
Alphaproteobacteria
TCC
Gly
>WENV170366596
CETO01080333
26326
Alphaproteobacteria
CGA
Ser
>WENV170366079
CETO01030491
160197
Alphaproteobacteria
GTC
Asp
>WENV170366151
CETO01037847
107829
Alphaproteobacteria
CAA
Leu
>WENV170365829
CETO01005803
160502
Alphaproteobacteria
GAT
Ile
>WENV170367022
CETO01171653
382630
Alphaproteobacteria
GAC
Val
>WENV170367055
CETO01174358
161060
Alphaproteobacteria
ACG
Arg
>WENV170366662
CETO01085574
160575
Alphaproteobacteria
CCT
Arg
>WENV170366931
CETO01156474
369406
Alphaproteobacteria
GAC
Val
>WENV170366178
CETO01039597
238723
Alphaproteobacteria
GTG
His
>WENV170366291
CETO01051346
309182
Alphaproteobacteria
TAC
Val
>WENV170366505
CETO01071537
89275
Alphaproteobacteria
GAG
Leu
>WENV170365994
CETO01021829
65064
Alphaproteobacteria
GAG
Leu
>WENV170366182
CETO01039910
65064
Alphaproteobacteria
GAG
Leu
>WENV170366512
CETO01072070
27338
Alphaproteobacteria
CGA
Ser
>WENV170366587
CETO01079296
231929
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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