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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170366804
CETO01114485
370082
Bacteroidota
GGT
Thr
>WENV170366213
CETO01043026
314601
Bacteroidota
>WENV170366632
CETO01083808
139505
Bacteroidota
TAC
Val
>WENV170366326
CETO01056316
116954
Bacteroidota
TAG
Leu
>WENV170366647
CETO01084864
116954
Bacteroidota
TAG
Leu
>WENV170366397
CETO01063913
139484
Bacteroidota
TAC
Val
>WENV170366722
CETO01088400
169559
Bacteroidota
GGG
Pro
>WENV170366773
CETO01102368
96382
Bacteroidota
GTA
Tyr
>WENV170367002
CETO01169129
21418
Bacteroidota
GGA
Ser
>WENV170365784
CETO01001958
263627
Bacteroidota
TTG
Gln
>WENV170366652
CETO01085071
177164
Bacteroidota
GTC
Asp
>WENV170365835
CETO01006492
188048
Bacteroidota
GGC
Ala
>WENV170366360
CETO01060475
144149
Bacteroidota
TGG
Pro
>WENV170365862
CETO01009004
158981
Bacteroidota
GGC
Ala
>WENV170365948
CETO01016365
454104
Bacteroidota
GCA
Cys
>WENV170365930
CETO01014748
24600
Bacteroidota
GGA
Ser
>WENV170365958
CETO01017592
310118
Bacteroidota
CCA
Trp
>WENV170365988
CETO01020989
23145
Bacteroidota
GGA
Ser
>WENV170366778
CETO01104340
111503
Bacteroidota
CAA
Leu
>WENV170365776
CETO01000789
311172
Bacteroidota
GAA
Phe
>WENV170366719
CETO01088342
325477
Bacteroidota
TTG
Gln
>WENV170365955
CETO01017155
301008
Bacteroidota
TTG
Gln
>WENV170365791
CETO01002219
139231
Bacteroidota
GAC
Val
>WENV170365861
CETO01008871
60145
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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