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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170374717
CETT01120685
160199
Alphaproteobacteria
GGG
Pro
>WENV170374901
CETT01139816
195158
Alphaproteobacteria
GTC
Asp
>WENV170375162
CETT01206402
448085
Alphaproteobacteria
TCC
Gly
>WENV170374679
CETT01117055
212253
Alphaproteobacteria
>WENV170373764
CETT01018823
175228
Alphaproteobacteria
CAT
Met
>WENV170374173
CETT01058177
369985
Alphaproteobacteria
GAA
Phe
>WENV170374526
CETT01096613
88859
Alphaproteobacteria
GTA
Tyr
>WENV170374166
CETT01057762
259563
Alphaproteobacteria
GGC
Ala
>WENV170375284
CETT01251158
383286
Alphaproteobacteria
GGT
Thr
>WENV170373896
CETT01030986
26326
Alphaproteobacteria
CGA
Ser
>WENV170373589
CETT01004301
406362
Alphaproteobacteria
GAA
Phe
>WENV170375285
CETT01251209
93190
Alphaproteobacteria
CAA
Leu
>WENV170373703
CETT01012340
395582
Alphaproteobacteria
CTC
Glu
>WENV170375281
CETT01249014
160197
Alphaproteobacteria
GTC
Asp
>WENV170374697
CETT01119006
166599
Alphaproteobacteria
CAT
Met
>WENV170374568
CETT01102085
377113
Alphaproteobacteria
GAC
Val
>WENV170374874
CETT01137968
105419
Alphaproteobacteria
TAA
Leu
>WENV170374983
CETT01149276
12053
Alphaproteobacteria
GCT
Ser
>WENV170374634
CETT01111627
302791
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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