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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170377003
CETU01120879
369984
Alphaproteobacteria
TTG
Gln
>WENV170377149
CETU01134110
313530
Alphaproteobacteria
CGC
Ala
>WENV170375619
CETU01006698
448544
Alphaproteobacteria
CTG
Gln
>WENV170376637
CETU01084285
160201
Alphaproteobacteria
TGG
Pro
>WENV170376392
CETU01062766
166628
Alphaproteobacteria
CAT
Met
>WENV170376314
CETU01055156
32838
Alphaproteobacteria
GCT
Ser
>WENV170377970
CETU01309286
369985
Alphaproteobacteria
GAA
Phe
>WENV170378022
CETU01323941
160215
Alphaproteobacteria
CAT
Met
>WENV170377625
CETU01169531
26326
Alphaproteobacteria
CGA
Ser
>WENV170375818
CETU01019848
278841
Alphaproteobacteria
TTT
Lys
>WENV170377077
CETU01127946
278841
Alphaproteobacteria
TTT
Lys
>WENV170377205
CETU01141624
377113
Alphaproteobacteria
GAC
Val
>WENV170377512
CETU01163274
207103
Alphaproteobacteria
GTG
His
>WENV170377471
CETU01161427
325069
Alphaproteobacteria
TTT
Lys
>WENV170376738
CETU01092033
205335
Alphaproteobacteria
GGG
Pro
>WENV170377409
CETU01157038
371034
Alphaproteobacteria
GAC
Val
>WENV170376750
CETU01093624
161303
Alphaproteobacteria
TCT
Arg
>WENV170376218
CETU01047403
105419
Alphaproteobacteria
TAA
Leu
>WENV170375606
CETU01006063
12053
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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