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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170377380
CETU01155098
165596
Bacteroidota
GGC
Ala
>WENV170375788
CETU01017306
213847
Bacteroidota
GTT
Asn
>WENV170376107
CETU01038802
213847
Bacteroidota
GTT
Asn
>WENV170375629
CETU01007434
370082
Bacteroidota
GGT
Thr
>WENV170375605
CETU01005987
160350
Bacteroidota
CAT
Met
>WENV170375949
CETU01028367
314601
Bacteroidota
>WENV170377922
CETU01293903
265680
Bacteroidota
>WENV170376992
CETU01119671
139505
Bacteroidota
TAC
Val
>WENV170375556
CETU01002791
139484
Bacteroidota
TAC
Val
>WENV170376194
CETU01044853
139484
Bacteroidota
TAC
Val
>WENV170377353
CETU01153421
139484
Bacteroidota
TAC
Val
>WENV170376946
CETU01114710
172147
Bacteroidota
GGC
Ala
>WENV170376742
CETU01092561
160351
Bacteroidota
TCT
Arg
>WENV170376647
CETU01085714
50342
Bacteroidota
TGA
Ser
>WENV170375793
CETU01017679
263627
Bacteroidota
TTG
Gln
>WENV170377500
CETU01162706
177164
Bacteroidota
GTC
Asp
>WENV170376475
CETU01070819
171098
Bacteroidota
>WENV170376950
CETU01115277
119207
Bacteroidota
TAG
Leu
>WENV170377645
CETU01169847
119207
Bacteroidota
TAG
Leu
>WENV170376914
CETU01111600
164620
Bacteroidota
GTG
His
>WENV170376708
CETU01088862
144149
Bacteroidota
TGG
Pro
>WENV170378023
CETU01323991
158981
Bacteroidota
GGC
Ala
>WENV170377410
CETU01157208
50353
Bacteroidota
TGA
Ser
>WENV170376776
CETU01095660
24600
Bacteroidota
GGA
Ser
>WENV170375747
CETU01013750
168483
Bacteroidota
GTT
Asn
>WENV170376174
CETU01043276
310118
Bacteroidota
CCA
Trp
>WENV170376912
CETU01111553
310118
Bacteroidota
CCA
Trp
>WENV170376821
CETU01099833
18750
Bacteroidota
GGA
Ser
>WENV170377543
CETU01165309
311172
Bacteroidota
GAA
Phe
>WENV170376292
CETU01053989
325477
Bacteroidota
TTG
Gln
>WENV170377412
CETU01157369
325477
Bacteroidota
TTG
Gln
>WENV170377097
CETU01130053
259964
Bacteroidota
>WENV170376903
CETU01110591
301008
Bacteroidota
TTG
Gln
>WENV170376254
CETU01050640
89123
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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