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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170376036
CETU01034271
46671
Cyanobacteriota
TAA
Leu
>WENV170376382
CETU01061587
46671
Cyanobacteriota
TAA
Leu
>WENV170375534
CETU01000620
400868
Cyanobacteriota
TTG
Gln
>WENV170377190
CETU01139401
400868
Cyanobacteriota
TTG
Gln
>WENV170377183
CETU01138713
105781
Cyanobacteriota
TAG
Leu
>WENV170377506
CETU01163025
160110
Cyanobacteriota
CCG
Arg
>WENV170376828
CETU01100381
161770
Cyanobacteriota
TCT
Arg
>WENV170376127
CETU01040359
161711
Cyanobacteriota
GTC
Asp
>WENV170376713
CETU01089443
182044
Cyanobacteriota
GTC
Asp
>WENV170375895
CETU01023646
265805
Cyanobacteriota
>WENV170376440
CETU01067662
302627
Cyanobacteriota
GGC
Ala
>WENV170377480
CETU01161697
160107
Cyanobacteriota
CAT
Met
>WENV170377991
CETU01315801
50867
Cyanobacteriota
TGA
Ser
>WENV170375820
CETU01019911
206157
Cyanobacteriota
CCG
Arg
>WENV170375600
CETU01005907
317075
Cyanobacteriota
CGC
Ala
>WENV170376869
CETU01104656
161771
Cyanobacteriota
CAT
Met
>WENV170376273
CETU01052296
258996
Cyanobacteriota
GTG
His
>WENV170376586
CETU01080344
258996
Cyanobacteriota
GTG
His
>WENV170377279
CETU01147868
105402
Cyanobacteriota
CAA
Leu
>WENV170376923
CETU01112356
377439
Cyanobacteriota
GTT
Asn
>WENV170376400
CETU01063412
105401
Cyanobacteriota
TAG
Leu
>WENV170376139
CETU01041304
369944
Cyanobacteriota
GAC
Val
>WENV170376007
CETU01031932
206160
Cyanobacteriota
CAT
Met
>WENV170376200
CETU01045090
206160
Cyanobacteriota
CAT
Met
>WENV170376621
CETU01082971
206160
Cyanobacteriota
CAT
Met
>WENV170376166
CETU01042789
258998
Cyanobacteriota
CGT
Thr
>WENV170376876
CETU01105692
36294
Cyanobacteriota
GGA
Ser
>WENV170377280
CETU01147935
161725
Cyanobacteriota
TCT
Arg
>WENV170376544
CETU01076615
28527
Cyanobacteriota
CGA
Ser
>WENV170376935
CETU01113983
117365
Cyanobacteriota
TAG
Leu
>WENV170376548
CETU01077468
369938
Cyanobacteriota
GTT
Asn
>WENV170376602
CETU01081963
369938
Cyanobacteriota
GTT
Asn
>WENV170376998
CETU01120488
369938
Cyanobacteriota
GTT
Asn
>WENV170376826
CETU01100346
41370
Cyanobacteriota
TAA
Leu
>WENV170376009
CETU01032052
65386
Cyanobacteriota
CAG
Leu
>WENV170376030
CETU01033562
65386
Cyanobacteriota
CAG
Leu
>WENV170378053
CETU01329470
370924
Cyanobacteriota
CCC
Gly
>WENV170376741
CETU01092430
406747
Cyanobacteriota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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