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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170375752
CETU01014243
174334
Gammaproteobacteria
>WENV170377696
CETU01170770
174334
Gammaproteobacteria
>WENV170377085
CETU01128685
275093
Gammaproteobacteria
GGT
Thr
>WENV170375812
CETU01019461
231877
Gammaproteobacteria
GAT
Ile
>WENV170377935
CETU01298131
21308
Gammaproteobacteria
GGA
Ser
>WENV170378176
CETU01344692
451853
Gammaproteobacteria
GCA
Cys
>WENV170377716
CETU01181741
172986
Gammaproteobacteria
CCA
Trp
>WENV170376379
CETU01060990
325641
Gammaproteobacteria
CCA
Trp
>WENV170376511
CETU01073892
259140
Gammaproteobacteria
TGC
Ala
>WENV170377083
CETU01128685
128911
Gammaproteobacteria
GTA
Tyr
>WENV170375956
CETU01028981
257590
Gammaproteobacteria
GGT
Thr
>WENV170377358
CETU01154338
258908
Gammaproteobacteria
CCT
Arg
>WENV170377771
CETU01219108
214281
Gammaproteobacteria
ACG
Arg
>WENV170377951
CETU01304284
306475
Gammaproteobacteria
GTG
His
>WENV170376638
CETU01084343
105812
Gammaproteobacteria
GTA
Tyr
>WENV170376790
CETU01097190
479393
Gammaproteobacteria
GCA
Cys
>WENV170377272
CETU01147427
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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