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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170379203
CETV01102469
338763
Actinomycetota
GCC
Gly
>WENV170379277
CETV01112513
242814
Actinomycetota
TTT
Lys
>WENV170379368
CETV01120897
343516
Actinomycetota
CCT
Arg
>WENV170378327
CETV01012788
266918
Actinomycetota
GCC
Gly
>WENV170378735
CETV01043798
45926
Actinomycetota
TGA
Ser
>WENV170379419
CETV01126849
95968
Actinomycetota
TAG
Leu
>WENV170379189
CETV01101308
237553
Actinomycetota
ACG
Arg
>WENV170379402
CETV01125100
95931
Actinomycetota
GTA
Tyr
>WENV170378689
CETV01040751
153188
Actinomycetota
CAT
Met
>WENV170378998
CETV01077392
16376
Actinomycetota
CGA
Ser
>WENV170378952
CETV01068507
236214
Actinomycetota
CCA
Trp
>WENV170378473
CETV01023894
236214
Actinomycetota
CCA
Trp
>WENV170379485
CETV01132337
421039
Actinomycetota
TCC
Gly
>WENV170378688
CETV01040751
237593
Actinomycetota
GTT
Asn
>WENV170378562
CETV01029208
152216
Actinomycetota
GAT
Ile
>WENV170379367
CETV01120897
149979
Actinomycetota
TGT
Thr
>WENV170379150
CETV01096278
179547
Actinomycetota
GGG
Pro
>WENV170378742
CETV01045024
254606
Actinomycetota
CCG
Arg
>WENV170379582
CETV01138283
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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