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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170381978
CETW01320533
396582
Alphaproteobacteria
GAC
Val
>WENV170381060
CETW01115802
166628
Alphaproteobacteria
CAT
Met
>WENV170381920
CETW01284904
265211
Alphaproteobacteria
CCA
Trp
>WENV170381948
CETW01302737
392647
Alphaproteobacteria
GGT
Thr
>WENV170381513
CETW01172211
393349
Alphaproteobacteria
GGT
Thr
>WENV170380804
CETW01081256
93190
Alphaproteobacteria
CAA
Leu
>WENV170381092
CETW01118610
369158
Alphaproteobacteria
GGT
Thr
>WENV170381076
CETW01117011
29052
Alphaproteobacteria
GGA
Ser
>WENV170381331
CETW01149702
29052
Alphaproteobacteria
GGA
Ser
>WENV170380772
CETW01077998
371034
Alphaproteobacteria
GAC
Val
>WENV170381304
CETW01146814
371034
Alphaproteobacteria
GAC
Val
>WENV170381123
CETW01122708
262836
Alphaproteobacteria
TAC
Val
>WENV170380641
CETW01064509
66074
Alphaproteobacteria
CAG
Leu
>WENV170380358
CETW01033218
449739
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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