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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170381037
CETW01113170
139505
Bacteroidota
TAC
Val
>WENV170380999
CETW01109274
449969
Bacteroidota
GCA
Cys
>WENV170380996
CETW01108927
139484
Bacteroidota
TAC
Val
>WENV170380556
CETW01054806
160351
Bacteroidota
TCT
Arg
>WENV170380713
CETW01071810
21418
Bacteroidota
GGA
Ser
>WENV170381096
CETW01118939
49783
Bacteroidota
TGA
Ser
>WENV170382077
CETW01354048
269121
Bacteroidota
TCC
Gly
>WENV170380180
CETW01011720
144149
Bacteroidota
TGG
Pro
>WENV170380377
CETW01034678
144149
Bacteroidota
TGG
Pro
>WENV170380908
CETW01095922
106261
Bacteroidota
TAG
Leu
>WENV170380062
CETW01000724
259964
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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