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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170381628
CETW01184573
448974
Gammaproteobacteria
GCA
Cys
>WENV170380256
CETW01018770
195797
Gammaproteobacteria
ACG
Arg
>WENV170380476
CETW01045816
195797
Gammaproteobacteria
ACG
Arg
>WENV170381106
CETW01120320
195797
Gammaproteobacteria
ACG
Arg
>WENV170381309
CETW01147171
451765
Gammaproteobacteria
GCA
Cys
>WENV170381615
CETW01183760
257075
Gammaproteobacteria
GTG
His
>WENV170381723
CETW01190983
263230
Gammaproteobacteria
TTT
Lys
>WENV170380767
CETW01077671
160668
Gammaproteobacteria
CAT
Met
>WENV170381834
CETW01222988
261088
Gammaproteobacteria
GGT
Thr
>WENV170380229
CETW01016490
300046
Gammaproteobacteria
TGT
Thr
>WENV170380770
CETW01077845
65736
Gammaproteobacteria
TAA
Leu
>WENV170381041
CETW01113711
65736
Gammaproteobacteria
TAA
Leu
>WENV170381204
CETW01134648
65736
Gammaproteobacteria
TAA
Leu
>WENV170381445
CETW01165227
65163
Gammaproteobacteria
CAA
Leu
>WENV170380232
CETW01016490
285013
Gammaproteobacteria
GGT
Thr
>WENV170381261
CETW01142458
172986
Gammaproteobacteria
CCA
Trp
>WENV170381208
CETW01135428
263086
Gammaproteobacteria
GTT
Asn
>WENV170381590
CETW01181298
263086
Gammaproteobacteria
GTT
Asn
>WENV170380230
CETW01016490
124716
Gammaproteobacteria
GTA
Tyr
>WENV170381613
CETW01183760
193317
Gammaproteobacteria
TGG
Pro
>WENV170380311
CETW01026324
189269
Gammaproteobacteria
CGG
Pro
>WENV170380352
CETW01032009
272258
Gammaproteobacteria
GGC
Ala
>WENV170381499
CETW01170350
18496
Gammaproteobacteria
GGA
Ser
>WENV170380069
CETW01001601
290512
Gammaproteobacteria
TGT
Thr
>WENV170381562
CETW01178717
191341
Gammaproteobacteria
CAT
Met
>WENV170381273
CETW01143369
105812
Gammaproteobacteria
GTA
Tyr
>WENV170380211
CETW01014856
265381
Gammaproteobacteria
GTT
Asn
>WENV170380253
CETW01018684
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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