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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170384370
CETX01289400
256881
Gammaproteobacteria
GTG
His
>WENV170382551
CETX01025665
65310
Gammaproteobacteria
CAG
Leu
>WENV170383205
CETX01085279
105077
Gammaproteobacteria
>WENV170382996
CETX01064850
18367
Gammaproteobacteria
GCT
Ser
>WENV170382450
CETX01016776
167096
Gammaproteobacteria
CCG
Arg
>WENV170382206
CETX01002488
108980
Gammaproteobacteria
TAG
Leu
>WENV170383874
CETX01147169
108980
Gammaproteobacteria
TAG
Leu
>WENV170382681
CETX01036883
263230
Gammaproteobacteria
TTT
Lys
>WENV170384081
CETX01219846
105430
Gammaproteobacteria
GTA
Tyr
>WENV170384263
CETX01265849
448854
Gammaproteobacteria
CCC
Gly
>WENV170383106
CETX01075468
18775
Gammaproteobacteria
GCT
Ser
>WENV170382650
CETX01033308
21308
Gammaproteobacteria
GGA
Ser
>WENV170382878
CETX01052677
301690
Gammaproteobacteria
GGC
Ala
>WENV170383759
CETX01142521
105723
Gammaproteobacteria
GAG
Leu
>WENV170383268
CETX01092129
177586
Gammaproteobacteria
TCT
Arg
>WENV170383352
CETX01099832
259002
Gammaproteobacteria
TGT
Thr
>WENV170384252
CETX01264242
65163
Gammaproteobacteria
CAA
Leu
>WENV170384148
CETX01235933
50077
Gammaproteobacteria
GGA
Ser
>WENV170383194
CETX01083231
172986
Gammaproteobacteria
CCA
Trp
>WENV170383279
CETX01093144
172986
Gammaproteobacteria
CCA
Trp
>WENV170383654
CETX01132922
112932
Gammaproteobacteria
GAG
Leu
>WENV170383377
CETX01102214
256945
Gammaproteobacteria
GAA
Phe
>WENV170383047
CETX01069164
193317
Gammaproteobacteria
TGG
Pro
>WENV170384371
CETX01289400
106574
Gammaproteobacteria
TAG
Leu
>WENV170382271
CETX01005246
262291
Gammaproteobacteria
TTC
Glu
>WENV170383693
CETX01136917
262291
Gammaproteobacteria
TTC
Glu
>WENV170383208
CETX01085471
159335
Gammaproteobacteria
CAT
Met
>WENV170383784
CETX01144245
159335
Gammaproteobacteria
CAT
Met
>WENV170382863
CETX01051378
263347
Gammaproteobacteria
TTT
Lys
>WENV170382676
CETX01036070
169863
Gammaproteobacteria
GGG
Pro
>WENV170384153
CETX01236539
65046
Gammaproteobacteria
CAG
Leu
>WENV170382553
CETX01025669
159341
Gammaproteobacteria
GAT
Ile
>WENV170383401
CETX01105220
105140
Gammaproteobacteria
TAG
Leu
>WENV170383129
CETX01077279
161939
Gammaproteobacteria
GAC
Val
>WENV170384318
CETX01277439
160118
Gammaproteobacteria
GTT
Asn
>WENV170383884
CETX01150390
50028
Gammaproteobacteria
GGA
Ser
>WENV170383270
CETX01092326
290512
Gammaproteobacteria
TGT
Thr
>WENV170383696
CETX01137373
290512
Gammaproteobacteria
TGT
Thr
>WENV170384178
CETX01244661
160116
Gammaproteobacteria
GAC
Val
>WENV170383904
CETX01157514
7933
Gammaproteobacteria
GCT
Ser
>WENV170383607
CETX01128075
105812
Gammaproteobacteria
GTA
Tyr
>WENV170384502
CETX01310179
26256
Gammaproteobacteria
CGA
Ser
>WENV170383887
CETX01152611
280351
Gammaproteobacteria
TTT
Lys
>WENV170383301
CETX01095671
462237
Gammaproteobacteria
GCA
Cys
>WENV170383407
CETX01105731
161319
Gammaproteobacteria
>WENV170383152
CETX01079039
65858
Gammaproteobacteria
CAA
Leu
>WENV170382894
CETX01054518
263987
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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