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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170385850
CETY01108057
30210
Alphaproteobacteria
GCT
Ser
>WENV170385891
CETY01113550
129948
Alphaproteobacteria
>WENV170385634
CETY01086525
259585
Alphaproteobacteria
CCA
Trp
>WENV170386662
CETY01189147
175228
Alphaproteobacteria
CAT
Met
>WENV170384866
CETY01020199
159552
Alphaproteobacteria
TGG
Pro
>WENV170386585
CETY01183559
392647
Alphaproteobacteria
GGT
Thr
>WENV170385328
CETY01060620
88884
Alphaproteobacteria
CAG
Leu
>WENV170385218
CETY01049786
98017
Alphaproteobacteria
CAA
Leu
>WENV170385163
CETY01045564
406362
Alphaproteobacteria
GAA
Phe
>WENV170385135
CETY01042734
114680
Alphaproteobacteria
TAG
Leu
>WENV170385908
CETY01116195
374019
Alphaproteobacteria
GAC
Val
>WENV170385678
CETY01092102
377113
Alphaproteobacteria
GAC
Val
>WENV170385168
CETY01045876
207103
Alphaproteobacteria
GTG
His
>WENV170385717
CETY01096693
205335
Alphaproteobacteria
GGG
Pro
>WENV170386374
CETY01164063
205335
Alphaproteobacteria
GGG
Pro
>WENV170385125
CETY01041447
372766
Alphaproteobacteria
TTG
Gln
>WENV170385057
CETY01035577
209273
Alphaproteobacteria
GTG
His
>WENV170386387
CETY01165936
178940
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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