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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170384672
CETY01005593
213847
Bacteroidota
GTT
Asn
>WENV170386612
CETY01185828
213847
Bacteroidota
GTT
Asn
>WENV170387478
CETY01437705
300555
Bacteroidota
CCA
Trp
>WENV170386882
CETY01204334
266737
Bacteroidota
TTT
Lys
>WENV170385228
CETY01050951
139505
Bacteroidota
TAC
Val
>WENV170385901
CETY01114991
139505
Bacteroidota
TAC
Val
>WENV170386121
CETY01134106
139505
Bacteroidota
TAC
Val
>WENV170386377
CETY01164467
139505
Bacteroidota
TAC
Val
>WENV170386723
CETY01192754
139505
Bacteroidota
TAC
Val
>WENV170385687
CETY01093282
449969
Bacteroidota
GCA
Cys
>WENV170385412
CETY01066700
199874
Bacteroidota
TGC
Ala
>WENV170384928
CETY01024738
116954
Bacteroidota
TAG
Leu
>WENV170387002
CETY01276043
370075
Bacteroidota
CCT
Arg
>WENV170384904
CETY01022541
139484
Bacteroidota
TAC
Val
>WENV170385301
CETY01056458
211884
Bacteroidota
TGC
Ala
>WENV170386648
CETY01187889
171792
Bacteroidota
GTG
His
>WENV170385898
CETY01114799
12157
Bacteroidota
GCT
Ser
>WENV170384915
CETY01023647
57357
Bacteroidota
TGA
Ser
>WENV170385235
CETY01051736
57357
Bacteroidota
TGA
Ser
>WENV170384782
CETY01014208
311209
Bacteroidota
TTG
Gln
>WENV170385464
CETY01070575
456030
Bacteroidota
CCA
Trp
>WENV170386460
CETY01172554
50342
Bacteroidota
TGA
Ser
>WENV170384972
CETY01028846
95721
Bacteroidota
GTA
Tyr
>WENV170385494
CETY01072660
178406
Bacteroidota
CAT
Met
>WENV170384710
CETY01008218
268933
Bacteroidota
>WENV170386605
CETY01185298
448301
Bacteroidota
>WENV170386929
CETY01236202
301034
Bacteroidota
GAA
Phe
>WENV170385138
CETY01042891
448855
Bacteroidota
GCA
Cys
>WENV170385615
CETY01084753
263627
Bacteroidota
TTG
Gln
>WENV170387405
CETY01421260
188048
Bacteroidota
GGC
Ala
>WENV170385203
CETY01047711
119207
Bacteroidota
TAG
Leu
>WENV170385504
CETY01073293
119207
Bacteroidota
TAG
Leu
>WENV170386848
CETY01197851
119207
Bacteroidota
TAG
Leu
>WENV170385075
CETY01037124
144149
Bacteroidota
TGG
Pro
>WENV170384945
CETY01025990
321470
Bacteroidota
GAA
Phe
>WENV170386502
CETY01176812
321470
Bacteroidota
GAA
Phe
>WENV170386821
CETY01197477
321470
Bacteroidota
GAA
Phe
>WENV170384954
CETY01026728
310118
Bacteroidota
CCA
Trp
>WENV170385260
CETY01053522
310118
Bacteroidota
CCA
Trp
>WENV170385487
CETY01072096
310118
Bacteroidota
CCA
Trp
>WENV170385559
CETY01076957
23145
Bacteroidota
GGA
Ser
>WENV170386628
CETY01186793
311172
Bacteroidota
GAA
Phe
>WENV170385500
CETY01073035
179763
Bacteroidota
GTG
His
>WENV170384691
CETY01007064
139231
Bacteroidota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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