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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170387600
CETY01452499
49681
Gammaproteobacteria
GGA
Ser
>WENV170386176
CETY01140373
262285
Gammaproteobacteria
TGC
Ala
>WENV170385691
CETY01093789
319314
Gammaproteobacteria
TGT
Thr
>WENV170385627
CETY01085810
10821
Gammaproteobacteria
GCT
Ser
>WENV170385742
CETY01097578
221435
Gammaproteobacteria
GGG
Pro
>WENV170384700
CETY01007409
65736
Gammaproteobacteria
TAA
Leu
>WENV170385336
CETY01061819
65736
Gammaproteobacteria
TAA
Leu
>WENV170386251
CETY01149890
65736
Gammaproteobacteria
TAA
Leu
>WENV170386827
CETY01197579
317662
Gammaproteobacteria
GGT
Thr
>WENV170387638
CETY01454797
159177
Gammaproteobacteria
GAC
Val
>WENV170385501
CETY01073132
229608
Gammaproteobacteria
CAT
Met
>WENV170387539
CETY01447042
172986
Gammaproteobacteria
CCA
Trp
>WENV170385624
CETY01085698
325641
Gammaproteobacteria
CCA
Trp
>WENV170385847
CETY01107958
277638
Gammaproteobacteria
GCC
Gly
>WENV170385031
CETY01032992
257590
Gammaproteobacteria
GGT
Thr
>WENV170385738
CETY01097524
257590
Gammaproteobacteria
GGT
Thr
>WENV170385846
CETY01107958
257884
Gammaproteobacteria
GCC
Gly
>WENV170385848
CETY01107958
257884
Gammaproteobacteria
GCC
Gly
>WENV170384630
CETY01002716
262529
Gammaproteobacteria
TAC
Val
>WENV170387144
CETY01336171
215947
Gammaproteobacteria
ACG
Arg
>WENV170387575
CETY01450299
467483
Gammaproteobacteria
GCA
Cys
>WENV170385935
CETY01117122
323358
Gammaproteobacteria
GGT
Thr
>WENV170387637
CETY01454797
159176
Gammaproteobacteria
GAC
Val
>WENV170386870
CETY01198105
65858
Gammaproteobacteria
CAA
Leu
>WENV170385146
CETY01043686
265381
Gammaproteobacteria
GTT
Asn
>WENV170385515
CETY01074093
265381
Gammaproteobacteria
GTT
Asn
>WENV170385892
CETY01113861
265381
Gammaproteobacteria
GTT
Asn
>WENV170384631
CETY01002716
236600
Gammaproteobacteria
GTC
Asp
>WENV170386498
CETY01176423
172987
Gammaproteobacteria
CCA
Trp
>WENV170387052
CETY01299919
449736
Gammaproteobacteria
GCA
Cys
>WENV170387296
CETY01389131
449736
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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